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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G41410.1 Os03t0123500-02 AT1G62990.1 11701881
AT5G41410.1 Os03t0673000-00 AT4G08150.1 11701881
AT5G41410.1 Os03t0673500-00 AT4G08150.1 11701881
AT5G41410.1 Os03t0727000-02 AT4G08150.1 11701881
AT5G41410.1 Os03t0727200-00 AT4G08150.1 11701881
AT5G41410.1 Os03t0771500-01 AT4G08150.1 11701881
AT5G41410.1 Os03t0772100-00 AT4G08150.1 11701881
AT5G41410.1 Os07t0129700-01 AT4G08150.1 11701881
AT5G41410.1 Os03t0673000-00 AT4G08150.1 15781858
AT5G41410.1 Os03t0673500-00 AT4G08150.1 15781858
AT5G41410.1 Os03t0727000-02 AT4G08150.1 15781858
AT5G41410.1 Os03t0727200-00 AT4G08150.1 15781858
AT5G41410.1 Os03t0771500-01 AT4G08150.1 15781858
AT5G41410.1 Os03t0772100-00 AT4G08150.1 15781858
AT5G41410.1 Os07t0129700-01 AT4G08150.1 15781858
AT5G41410.1 Os03t0673000-00 AT4G08150.1 17873098
AT5G41410.1 Os03t0673500-00 AT4G08150.1 17873098
AT5G41410.1 Os03t0727000-02 AT4G08150.1 17873098
AT5G41410.1 Os03t0727200-00 AT4G08150.1 17873098
AT5G41410.1 Os03t0771500-01 AT4G08150.1 17873098
AT5G41410.1 Os03t0772100-00 AT4G08150.1 17873098
AT5G41410.1 Os07t0129700-01 AT4G08150.1 17873098
AT5G41410.1 Os05t0517100-00 AT4G18830.1 15781858
AT5G41410.1 Os02t0182800-01 AT4G32040.1 11701881
AT5G41410.1 Os06t0646600-01 AT4G32040.1 11701881
AT5G41410.1 Os02t0182800-01 AT4G32040.1 17873098
AT5G41410.1 Os06t0646600-01 AT4G32040.1 17873098
AT5G41410.1 Os02t0182800-01 AT5G11060.1 11701881
AT5G41410.1 Os06t0646600-01 AT5G11060.1 11701881
AT5G41410.1 Os02t0182800-01 AT5G25220.1 11701881
AT5G41410.1 Os06t0646600-01 AT5G25220.1 11701881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER89055 Sorghum nucleus 57.92 58.59
Zm00001d035907_P001 Maize nucleus 54.72 58.23
TraesCS4A01G469900.1 Wheat nucleus 53.96 57.66
TraesCS7D01G019800.1 Wheat nucleus 52.26 57.35
TraesCS7A01G022600.1 Wheat nucleus 50.75 55.69
CDY45383 Canola nucleus 23.77 47.91
GSMUA_Achr2P04310_001 Banana nucleus 41.7 39.61
GSMUA_Achr1P06400_001 Banana nucleus 38.11 39.15
Os10t0534900-01 Rice nucleus 39.43 35.67
VIT_02s0025g00200.t01 Wine grape nucleus 42.26 34.67
Os03t0124000-01 Rice nucleus 38.49 34.52
Solyc08g081400.2.1 Tomato nucleus 40.75 33.54
PGSC0003DMT400032122 Potato nucleus 40.0 33.49
KRH27902 Soybean nucleus 40.57 33.49
CDY44476 Canola nucleus 35.85 33.45
KRH77572 Soybean nucleus 40.75 33.44
Bra025497.1-P Field mustard nucleus 36.79 32.88
KRH41225 Soybean nucleus 39.62 32.51
KRH59951 Soybean nucleus 38.87 32.44
Os11t0158600-00 Rice nucleus 25.47 32.14
AT5G41410.1 Thale cress nucleus 36.79 31.91
Os03t0680700-00 Rice nucleus 19.43 29.77
Os03t0165300-02 Rice endoplasmic reticulum, vacuole 29.62 25.61
Os12t0636200-01 Rice nucleus 29.25 23.96
Os05t0455200-01 Rice nucleus 25.09 22.93
Os01t0848400-01 Rice nucleus 25.85 22.39
Os03t0680800-02 Rice nucleus 27.92 21.93
Os03t0732100-01 Rice nucleus 32.64 21.9
Os02t0226600-01 Rice nucleus 16.23 15.96
Os06t0562300-00 Rice nucleus 16.23 15.78
Os11t0158832-00 Rice nucleus 5.09 10.27
Protein Annotations
Gene3D:1.10.10.60MapMan:15.5.3.5EntrezGene:4339876ProteinID:BAF18486.1ProteinID:BAS95771.1ncoils:Coil
GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987InterPro:Homeobox-like_sfInterPro:Homeobox_KN_domainInterPro:Homeobox_domInterPro:IPR001356
EnsemblPlantsGene:Os06g0108900EnsemblPlants:Os06t0108900-02PFAM:PF05920PFAM:PF07526InterPro:POX_domPFscan:PS50071
PANTHER:PTHR11850PANTHER:PTHR11850:SF66UniProt:Q0DF87SMART:SM00389SMART:SM00574SUPFAM:SSF46689
UniParc:UPI0000E1263CRefSeq:XP_015641004.1SEG:seg:::
Description
bell-like homeodomain protein, BELL1 homologSimilar to H0613A10.3 protein. (Os06t0108900-01);Homeodomain-related domain containing protein. (Os06t0108900-02)
Coordinates
chr6:+:523060..530057
Molecular Weight (calculated)
58368.6 Da
IEP (calculated)
8.024
GRAVY (calculated)
-0.583
Length
530 amino acids
Sequence
(BLAST)
001: MMAAHHHHHE HHHLLDMSSP PNASGAIISS FDHAAGLLSL HDVAAAADHH HHHLRGGGGG LQLPSPWSQQ QVSLSLYNNA AGAAGSPPSS LVAHQQLAAA
101: QPLMFQLRGS KYLGPVKALL AEFCSLDVEA MDGAKQQRPP NPNPKIGKWD DVEGSGSWGN LSLSSMDLLD LERRKARILS MVEEVDRRYR RYREQMRAVE
201: VSFEAVAGGG AAQVYTKLAM RAMSRHFRCL RDALVGQVRA LRNAMGESQR DAAGGVAAAA PGATKGDTPR LRVLDQCLRQ QRAFQQSGAV DSFPWRPQRG
301: LPERAVAVLR AWLFEHFLHP YPNDVDKHIL ARQTGLSRSQ VSNWFINARV RLWKPMIEDM YKEETKPESS DGNNKLNPSA AGNKQQHRDD PKKNYTATTA
401: EASLVQQSSY HLHLRSSGNR NSSSLMIPAA ASTSIDHHHD SSHQLLGGHS YSSAAGLHHG HGGAVSLTLG LQQQQQPFAA SMMHQHQQHQ HQHQQQQSFM
501: VEAAEEEEDD VLPYRNLMES QLLHDFAGAS
Best Arabidopsis Sequence Match ( AT5G41410.1 )
(BLAST)
001: MARDQFYGHN NHHHQEQQHQ MINQIQGFDE TNQNPTDHHH YNHQIFGSNS NMGMMIDFSK QQQIRMTSGS DHHHHHHQTS GGTDQNQLLE DSSSAMRLCN
101: VNNDFPSEVN DERPPQRPSQ GLSLSLSSSN PTSISLQSFE LRPQQQQQQG YSGNKSTQHQ NLQHTQMMMM MMNSHHQNNN NNNHQHHNHH QFQIGSSKYL
201: SPAQELLSEF CSLGVKESDE EVMMMKHKKK QKGKQQEEWD TSHHSNNDQH DQSATTSSKK HVPPLHSLEF MELQKRKAKL LSMLEELKRR YGHYREQMRV
301: AAAAFEAAVG LGGAEIYTAL ASRAMSRHFR CLKDGLVGQI QATSQALGER EEDNRAVSIA ARGETPRLRL LDQALRQQKS YRQMTLVDAH PWRPQRGLPE
401: RAVTTLRAWL FEHFLHPYPS DVDKHILARQ TGLSRSQVSN WFINARVRLW KPMIEEMYCE ETRSEQMEIT NPMMIDTKPD PDQLIRVEPE SLSSIVTNPT
501: SKSGHNSTHG TMSLGSTFDF SLYGNQAVTY AGEGGPRGDV SLTLGLQRND GNGGVSLALS PVTAQGGQLF YGRDHIEEGP VQYSASMLDD DQVQNLPYRN
601: LMGAQLLHDI V
Arabidopsis Description
BEL1Homeobox protein BEL1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q38897]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.