Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY63738 | Canola | nucleus | 94.1 | 93.27 |
| CDY57925 | Canola | nucleus | 97.05 | 82.66 |
| Bra018461.1-P | Field mustard | nucleus | 75.22 | 79.19 |
| Bra031700.1-P | Field mustard | nucleus | 71.68 | 74.31 |
| KRH52141 | Soybean | nucleus | 34.51 | 39.13 |
| VIT_18s0001g08600.t01 | Wine grape | nucleus | 49.26 | 38.84 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 25.07 | 37.61 |
| Solyc04g077480.2.1 | Tomato | nucleus | 41.3 | 36.65 |
| PGSC0003DMT400012591 | Potato | nucleus | 40.71 | 36.13 |
| KRH61450 | Soybean | nucleus | 39.82 | 35.9 |
| KRH15460 | Soybean | nucleus | 45.13 | 35.66 |
| Os03t0728900-00 | Rice | cytosol, nucleus | 28.02 | 35.19 |
| KRG88634 | Soybean | nucleus, plastid | 45.13 | 35.17 |
| TraesCS4D01G058900.1 | Wheat | nucleus | 31.56 | 33.86 |
| OQU91059 | Sorghum | nucleus | 30.97 | 33.33 |
| Zm00001d033870_P001 | Maize | nucleus | 31.27 | 32.82 |
| TraesCS4A01G255800.3 | Wheat | nucleus | 31.27 | 32.62 |
| TraesCS4B01G059000.1 | Wheat | nucleus | 30.97 | 32.51 |
| HORVU4Hr1G009970.28 | Barley | nucleus | 30.97 | 32.51 |
| Bra019935.1-P | Field mustard | nucleus | 25.66 | 32.46 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.84 | 32.16 |
| Bra022753.1-P | Field mustard | nucleus | 26.25 | 29.97 |
| Bra034636.1-P | Field mustard | nucleus | 23.89 | 28.83 |
| Bra037059.1-P | Field mustard | nucleus | 23.89 | 28.32 |
| Bra028335.1-P | Field mustard | nucleus | 27.43 | 28.01 |
| Bra014972.1-P | Field mustard | nucleus | 27.14 | 27.96 |
| Bra011540.1-P | Field mustard | nucleus | 26.84 | 27.74 |
| Bra038336.1-P | Field mustard | plastid | 28.02 | 26.03 |
| Bra004679.1-P | Field mustard | nucleus | 22.42 | 25.17 |
| Bra003300.1-P | Field mustard | nucleus | 23.01 | 24.22 |
| Zm00001d013357_P001 | Maize | nucleus | 24.48 | 23.85 |
| Bra004348.1-P | Field mustard | nucleus | 32.15 | 22.9 |
| Bra029640.1-P | Field mustard | nucleus, plastid | 29.2 | 22.3 |
| Bra014603.1-P | Field mustard | nucleus | 22.71 | 22.25 |
| Bra020691.1-P | Field mustard | nucleus | 28.91 | 22.02 |
| Bra007358.1-P | Field mustard | nucleus | 23.01 | 21.79 |
| Bra037478.1-P | Field mustard | nucleus | 29.2 | 20.2 |
Protein Annotations
| EnsemblPlants:Bra019962.1 | EnsemblPlants:Bra019962.1-P | EnsemblPlantsGene:Bra019962 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000253E996 | UniProt:M4DTW9 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : |
Description
AT1G10120 (E=1e-118) | DNA binding / transcription factor
Coordinates
chrA06:-:3487155..3488874
Molecular Weight (calculated)
37211.5 Da
IEP (calculated)
6.791
GRAVY (calculated)
-0.795
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGESNEGEM GLNHGDDQSG ISRVGMPLYA KSDPFFSSTD WDPAVNVGGF SSSHYPSMGM DNPGMSCFPH YQTGSGSGYP DMPASLLPFG DCGGGGGGHF
101: LGSDKKGESA GRLVIAGDGH QVSDDVVLGG SSNRKRRQPE AESQWNKKAV EEFQEDPQSQ KKQKNDQSKE KMTKESSQSD EAPKENYIHM RARRGQATNS
201: HSLAERVRRE KISERMRLLQ ELVPGCNKIT GKAVMLDEII NYVQSLQQQV EFLSMKLSTV NPELNIDIDR LLAKDPRDRN TPTLGLNPFA RFQGTIPNIS
301: TPTAPQYNSL PQASNNSRNN TSCFCHHFKS IETRALVLP
101: LGSDKKGESA GRLVIAGDGH QVSDDVVLGG SSNRKRRQPE AESQWNKKAV EEFQEDPQSQ KKQKNDQSKE KMTKESSQSD EAPKENYIHM RARRGQATNS
201: HSLAERVRRE KISERMRLLQ ELVPGCNKIT GKAVMLDEII NYVQSLQQQV EFLSMKLSTV NPELNIDIDR LLAKDPRDRN TPTLGLNPFA RFQGTIPNIS
301: TPTAPQYNSL PQASNNSRNN TSCFCHHFKS IETRALVLP
001: MGGESNEGGE MGFKHGDDES GGISRVGITS MPLYAKADPF FSSADWDPVV NAAAAGFSSS HYHPSMAMDN PGMSCFSHYQ PGSVSGFAAD MPASLLPFGD
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
Arabidopsis Description
BHLH74Transcription factor bHLH74 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKN9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.