Factsheet for Bra031700.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53834	Canola	nucleus	95.41	89.91
CDY22605	Canola	nucleus	93.58	86.69
Bra018461.1-P	Field mustard	nucleus	74.01	75.16
AT1G10120.1	Thale cress	nucleus	84.1	75.14
Bra019962.1-P	Field mustard	nucleus	74.31	71.68
KRH52141	Soybean	nucleus	36.7	40.13
Solyc04g077480.2.1	Tomato	nucleus	46.48	39.79
PGSC0003DMT400012591	Potato	nucleus	45.87	39.27
VIT_18s0001g08600.t01	Wine grape	nucleus	50.46	38.37
KRH61450	Soybean	nucleus	42.81	37.23
KRH15460	Soybean	nucleus	48.32	36.83
KRG88634	Soybean	nucleus, plastid	48.32	36.32
Os03t0728900-00	Rice	cytosol, nucleus	29.97	36.3
GSMUA_Achr1P27010_001	Banana	nucleus	24.46	35.4
OQU91059	Sorghum	nucleus	33.03	34.29
TraesCS4D01G058900.1	Wheat	nucleus	32.42	33.54
Zm00001d033870_P001	Maize	nucleus	33.03	33.44
Bra019935.1-P	Field mustard	nucleus	27.22	33.21
TraesCS4A01G255800.3	Wheat	nucleus	32.72	32.92
TraesCS4B01G059000.1	Wheat	nucleus	32.42	32.82
HORVU4Hr1G009970.28	Barley	nucleus	32.42	32.82
GSMUA_AchrUn_...	Banana	nucleus	27.83	32.16
Bra037059.1-P	Field mustard	nucleus	27.52	31.47
Bra014972.1-P	Field mustard	nucleus	30.28	30.09
Bra022753.1-P	Field mustard	nucleus	26.91	29.63
Bra028335.1-P	Field mustard	nucleus	29.36	28.92
Bra034636.1-P	Field mustard	nucleus	24.77	28.83
Bra011540.1-P	Field mustard	nucleus	28.13	28.05
Bra038336.1-P	Field mustard	plastid	30.58	27.4
Bra003300.1-P	Field mustard	nucleus	25.08	25.47
Zm00001d013357_P001	Maize	nucleus	26.61	25.0
Bra004679.1-P	Field mustard	nucleus	22.32	24.17
Bra004348.1-P	Field mustard	nucleus	34.86	23.95
Bra014603.1-P	Field mustard	nucleus	24.77	23.41
Bra007358.1-P	Field mustard	nucleus	24.46	22.35
Bra029640.1-P	Field mustard	nucleus, plastid	29.66	21.85
Bra020691.1-P	Field mustard	nucleus	29.36	21.57
Bra037478.1-P	Field mustard	nucleus	29.97	20.0

Protein Annotations

MapMan:15.5.32	MapMan:26.1.2.1.2	Gene3D:4.10.280.10	EnsemblPlantsGene:Bra031700	EnsemblPlants:Bra031700.1	EnsemblPlants:Bra031700.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	UniProt:M4ESC2	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR12565
PANTHER:PTHR12565:SF184	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI00025431C5	InterPro:bHLH_dom	SEG:seg

Description

AT1G10120 (E=2e-108) | DNA binding / transcription factor

Coordinates

chrA09:+:35181700..35183123

Molecular Weight (calculated)

36181.1 Da

IEP (calculated)

5.421

GRAVY (calculated)

-0.836

Length

327 amino acids

Sequence
(BLAST)

001: MDGESNNEGE MGLNHGHDPS MPLYAKTDPY FSSSDWDPVV NGGGFSSSHY PSVVMDNPGM SCFTHFQTAS GYPDMPASLL PFGDCGGGGG ESVGRLMRAG
101: ESHDQVLDDG VLGSSPSRKR RQAEAESQRN KKAVEEYQED TQRGSDQNQK KHKDGQNKES SQSEEAPKEN YIHMRARRGK ATNSHSLAER VRREKISERM
201: RLLQELVPGC NKITGKAVML DEIINYVQSL QQQVEFLSMK LATVNPEVNI DIDRIIAKDL LQPRDRNIPT LGLNPFTSFQ GNISTTTNPQ YNPLPQTTLE
301: SELQSLYQMG FVSNPSTMSS FSPNNGN

Best Arabidopsis Sequence Match ( AT1G10120.1 )
(BLAST)

001: MGGESNEGGE MGFKHGDDES GGISRVGITS MPLYAKADPF FSSADWDPVV NAAAAGFSSS HYHPSMAMDN PGMSCFSHYQ PGSVSGFAAD MPASLLPFGD
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL

Arabidopsis Description

BHLH74Transcription factor bHLH74 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKN9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.