Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31048 | Canola | nucleus | 89.13 | 91.4 |
| CDY20659 | Canola | nucleus | 88.51 | 85.59 |
| Bra019962.1-P | Field mustard | nucleus | 79.19 | 75.22 |
| Bra031700.1-P | Field mustard | nucleus | 75.16 | 74.01 |
| AT1G10120.1 | Thale cress | nucleus | 82.61 | 72.68 |
| KRH52141 | Soybean | nucleus | 37.27 | 40.13 |
| GSMUA_Achr1P27010_001 | Banana | nucleus | 27.64 | 39.38 |
| VIT_18s0001g08600.t01 | Wine grape | nucleus | 51.55 | 38.6 |
| Solyc04g077480.2.1 | Tomato | nucleus | 43.79 | 36.91 |
| Os03t0728900-00 | Rice | cytosol, nucleus | 30.75 | 36.67 |
| KRH15460 | Soybean | nucleus | 48.76 | 36.6 |
| PGSC0003DMT400012591 | Potato | nucleus | 43.17 | 36.39 |
| KRH61450 | Soybean | nucleus | 42.24 | 36.17 |
| KRG88634 | Soybean | nucleus, plastid | 48.14 | 35.63 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.75 | 34.98 |
| TraesCS4D01G058900.1 | Wheat | nucleus | 32.92 | 33.54 |
| OQU91059 | Sorghum | nucleus | 32.3 | 33.02 |
| TraesCS4B01G059000.1 | Wheat | nucleus | 32.61 | 32.51 |
| TraesCS4A01G255800.3 | Wheat | nucleus | 32.61 | 32.31 |
| HORVU4Hr1G009970.28 | Barley | nucleus | 32.3 | 32.2 |
| Bra019935.1-P | Field mustard | nucleus | 26.71 | 32.09 |
| Zm00001d033870_P001 | Maize | nucleus | 31.68 | 31.58 |
| Bra022753.1-P | Field mustard | nucleus | 27.95 | 30.3 |
| Bra034636.1-P | Field mustard | nucleus | 25.47 | 29.18 |
| Bra014972.1-P | Field mustard | nucleus | 29.5 | 28.88 |
| Bra037059.1-P | Field mustard | nucleus | 25.47 | 28.67 |
| Bra011540.1-P | Field mustard | nucleus | 28.57 | 28.05 |
| Bra028335.1-P | Field mustard | nucleus | 28.57 | 27.71 |
| Bra038336.1-P | Field mustard | plastid | 30.43 | 26.85 |
| Bra004679.1-P | Field mustard | nucleus | 23.29 | 24.83 |
| Bra003300.1-P | Field mustard | nucleus | 24.22 | 24.22 |
| Zm00001d013357_P001 | Maize | nucleus | 26.09 | 24.14 |
| Bra004348.1-P | Field mustard | nucleus | 34.16 | 23.11 |
| Bra014603.1-P | Field mustard | nucleus | 24.22 | 22.54 |
| Bra029640.1-P | Field mustard | nucleus, plastid | 29.81 | 21.62 |
| Bra007358.1-P | Field mustard | nucleus | 23.6 | 21.23 |
| Bra020691.1-P | Field mustard | nucleus | 28.88 | 20.9 |
| Bra037478.1-P | Field mustard | nucleus | 30.12 | 19.8 |
Protein Annotations
| EnsemblPlants:Bra018461.1 | EnsemblPlants:Bra018461.1-P | EnsemblPlantsGene:Bra018461 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom |
| PANTHER:PTHR12565 | PANTHER:PTHR12565:SF184 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000254801B | UniProt:M4DPM0 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : |
Description
AT1G10120 (E=2e-120) | DNA binding / transcription factor
Coordinates
chrA05:+:8315265..8316965
Molecular Weight (calculated)
35595.7 Da
IEP (calculated)
6.430
GRAVY (calculated)
-0.757
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGENNEGEM GFKHVDDESG ISRVGVTSTD HFFSSVDWDP VVSGGGFSSS HYTSMVMDNP GMSCFPHYQT GSGYPDMPPS LLPFGDCVGG GPVLGSDKKG
101: ESVGRLIRAG ESHQVSDDVV LGASPSRKRR QLEAESSQRN KKAVEEFLEE PQRGSDQSQK KHKNDQSKEK ESSQSEEAPE KNYIHMRARR GQATNSHSLA
201: ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEL NIDIDRILAK DIMQSRDVRT TPTLGLNPFS GFQGTIPNVP
301: TTTNSQYNPL HQASNSRLKP EL
101: ESVGRLIRAG ESHQVSDDVV LGASPSRKRR QLEAESSQRN KKAVEEFLEE PQRGSDQSQK KHKNDQSKEK ESSQSEEAPE KNYIHMRARR GQATNSHSLA
201: ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEL NIDIDRILAK DIMQSRDVRT TPTLGLNPFS GFQGTIPNVP
301: TTTNSQYNPL HQASNSRLKP EL
001: MGGESNEGGE MGFKHGDDES GGISRVGITS MPLYAKADPF FSSADWDPVV NAAAAGFSSS HYHPSMAMDN PGMSCFSHYQ PGSVSGFAAD MPASLLPFGD
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
101: CGGGQIGHFL GSDKKGERLI RAGESSHEDH HQVSDDAVLG ASPVGKRRLP EAESQWNKKA VEEFQEDPQR GNDQSQKKHK NDQSKETVNK ESSQSEEAPK
201: ENYIHMRARR GQATNSHSLA ERVRREKISE RMRLLQELVP GCNKITGKAV MLDEIINYVQ SLQQQVEFLS MKLATVNPEI NIDIDRILAK DLLQSRDRNT
301: PTLGLNPFAG FQGNIPNLSA TTNPQYNPLP QTTLESELQN LYQMGFVSNP STMSSFSPNG RLKPEL
Arabidopsis Description
BHLH74Transcription factor bHLH74 [Source:UniProtKB/Swiss-Prot;Acc:Q6NKN9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.