Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g034000.2.1 | Tomato | nucleus | 93.28 | 93.98 |
| PGSC0003DMT400040021 | Potato | nucleus | 53.73 | 47.52 |
| PGSC0003DMT400004855 | Potato | nucleus | 29.48 | 35.75 |
| VIT_04s0023g01930.t01 | Wine grape | nucleus | 44.78 | 32.79 |
| PGSC0003DMT400058204 | Potato | nucleus | 29.48 | 29.26 |
| GSMUA_Achr6P09050_001 | Banana | nucleus | 32.09 | 27.22 |
| PGSC0003DMT400069568 | Potato | nucleus | 28.73 | 27.11 |
| PGSC0003DMT400062844 | Potato | nucleus | 29.1 | 26.8 |
| Zm00001d051569_P001 | Maize | nucleus | 32.46 | 25.44 |
| TraesCS6D01G253000.1 | Wheat | nucleus | 32.84 | 24.86 |
| TraesCS6B01G300400.1 | Wheat | nucleus | 32.46 | 24.79 |
| Os02t0705500-01 | Rice | nucleus | 32.84 | 24.38 |
| TraesCS6A01G273000.2 | Wheat | nucleus | 32.84 | 24.38 |
| PGSC0003DMT400001888 | Potato | nucleus | 39.55 | 23.98 |
| EES05656 | Sorghum | nucleus | 31.72 | 23.68 |
| PGSC0003DMT400051137 | Potato | nucleus | 29.85 | 23.67 |
| PGSC0003DMT400021130 | Potato | nucleus | 30.22 | 22.5 |
| Zm00001d017778_P001 | Maize | nucleus | 32.09 | 22.4 |
| HORVU6Hr1G068980.2 | Barley | nucleus | 32.09 | 22.28 |
| GSMUA_Achr10P... | Banana | nucleus | 33.21 | 22.14 |
| PGSC0003DMT400042791 | Potato | nucleus | 35.07 | 21.41 |
| PGSC0003DMT400012591 | Potato | nucleus | 30.22 | 21.2 |
| PGSC0003DMT400011651 | Potato | nucleus | 30.97 | 20.1 |
| PGSC0003DMT400051980 | Potato | mitochondrion, nucleus | 34.33 | 19.7 |
| PGSC0003DMT400004830 | Potato | nucleus | 33.58 | 19.44 |
| PGSC0003DMT400053639 | Potato | nucleus | 34.7 | 18.9 |
| PGSC0003DMT400050585 | Potato | nucleus | 36.19 | 18.65 |
| PGSC0003DMT400022704 | Potato | nucleus | 35.45 | 17.76 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400058169 | EnsemblPlantsGene:PGSC0003DMG400022578 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF184 | PFAM:PF00010 | PFscan:PS50888 | PGSC:PGSC0003DMG400022578 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0002967121 | UniProt:M1C273 | MapMan:15.5.32 | MapMan:26.1.2.1.2 | : | : |
Description
Transcription factor bHLH63 [Source:PGSC_GENE;Acc:PGSC0003DMG400022578]
Coordinates
chr3:-:4242460..4245782
Molecular Weight (calculated)
30774.6 Da
IEP (calculated)
7.843
GRAVY (calculated)
-0.725
Length
268 amino acids
Sequence
(BLAST)
(BLAST)
001: MSILERQRAI FEHLYQCQQQ QTSNSLPNQN LAQLNSLMSE HTMEFSQFQN FPIKIDTQID FGSEKRNWTS KKRKSEFNEE DECKVKRHDG EAGEVQTEMI
101: VKSEKGKNSK ENLEAKNTDF IHVRARRGQA TDSHSLAERA RREKISKKMK CLQDLVPGCN KAIGKAGMLD EIINYVQSLQ KQVEFLSIKL ATSNMNTDNL
201: FAKELPNPTF LQQQGNSNIG VTQMLPQRRE NCLMSFPEAF LDSSNVLALQ HLPNLETDLQ CLFGVRFQ
101: VKSEKGKNSK ENLEAKNTDF IHVRARRGQA TDSHSLAERA RREKISKKMK CLQDLVPGCN KAIGKAGMLD EIINYVQSLQ KQVEFLSIKL ATSNMNTDNL
201: FAKELPNPTF LQQQGNSNIG VTQMLPQRRE NCLMSFPEAF LDSSNVLALQ HLPNLETDLQ CLFGVRFQ
001: MNGAIGGDLL LNFPDMSVLE RQRAHLKYLN PTFDSPLAGF FADSSMITGG EMDSYLSTAG LNLPMMYGET TVEGDSRLSI SPETTLGTGN FKKRKFDTET
101: KDCNEKKKKM TMNRDDLVEE GEEEKSKITE QNNGSTKSIK KMKHKAKKEE NNFSNDSSKV TKELEKTDYI HVRARRGQAT DSHSIAERVR REKISERMKF
201: LQDLVPGCDK ITGKAGMLDE IINYVQSLQR QIEFLSMKLA IVNPRPDFDM DDIFAKEVAS TPMTVVPSPE MVLSGYSHEM VHSGYSSEMV NSGYLHVNPM
301: QQVNTSSDPL SCFNNGEAPS MWDSHVQNLY GNLGV
101: KDCNEKKKKM TMNRDDLVEE GEEEKSKITE QNNGSTKSIK KMKHKAKKEE NNFSNDSSKV TKELEKTDYI HVRARRGQAT DSHSIAERVR REKISERMKF
201: LQDLVPGCDK ITGKAGMLDE IINYVQSLQR QIEFLSMKLA IVNPRPDFDM DDIFAKEVAS TPMTVVPSPE MVLSGYSHEM VHSGYSSEMV NSGYLHVNPM
301: QQVNTSSDPL SCFNNGEAPS MWDSHVQNLY GNLGV
Arabidopsis Description
BHLH63CIB1 [Source:UniProtKB/TrEMBL;Acc:A0A178V495]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.