Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d044874_P001 | |
| Zm00001d052194_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G50680.1 | Zm00001d044874_P001 | AT4G25200.1 | 21798944 |
| AT5G50680.1 | Zm00001d052194_P001 | AT4G25200.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES08513 | Sorghum | cytosol | 93.39 | 92.84 |
| TraesCS7D01G370300.1 | Wheat | cytosol | 82.88 | 83.13 |
| TraesCS7A01G352700.2 | Wheat | cytosol | 81.38 | 82.37 |
| Os11t0497000-01 | Rice | cytosol | 81.08 | 82.32 |
| TraesCS3B01G105300.2 | Wheat | cytosol | 80.18 | 80.42 |
| TraesCS3A01G090000.1 | Wheat | cytosol | 79.88 | 80.12 |
| TraesCS3D01G090000.1 | Wheat | cytosol | 79.58 | 79.82 |
| TraesCS7B01G275300.1 | Wheat | cytosol | 77.48 | 77.95 |
| HORVU2Hr1G027820.1 | Barley | cytosol | 19.22 | 71.11 |
| HORVU7Hr1G089410.1 | Barley | cytosol, mitochondrion, nucleus | 81.68 | 71.02 |
| GSMUA_AchrUn_... | Banana | cytosol | 64.86 | 66.87 |
| VIT_17s0000g01270.t01 | Wine grape | cytosol | 60.96 | 62.85 |
| PGSC0003DMT400069346 | Potato | cytosol | 59.16 | 61.56 |
| Solyc06g072080.2.1 | Tomato | cytosol | 57.96 | 60.69 |
| CDX93356 | Canola | cytosol | 58.26 | 60.25 |
| CDX92842 | Canola | cytosol | 58.26 | 60.25 |
| PGSC0003DMT400039493 | Potato | cytosol | 57.96 | 59.75 |
| KRH59806 | Soybean | cytosol, nucleus | 59.16 | 59.52 |
| KRH41120 | Soybean | nucleus | 50.15 | 59.43 |
| AT5G50580.2 | Thale cress | cytosol | 57.06 | 59.38 |
| AT5G50680.1 | Thale cress | cytosol | 57.06 | 59.38 |
| AT4G24940.1 | Thale cress | cytosol | 57.36 | 59.32 |
| Bra013848.1-P | Field mustard | cytosol | 57.06 | 59.01 |
| CDY34327 | Canola | cytosol | 57.06 | 59.01 |
| CDY03404 | Canola | cytosol | 56.46 | 58.39 |
| HORVU3Hr1G016010.1 | Barley | cytosol, plastid | 80.18 | 57.3 |
| CDY08955 | Canola | cytosol | 18.02 | 56.6 |
| Solyc03g019730.2.1 | Tomato | mitochondrion | 57.96 | 55.78 |
| CDY08954 | Canola | cytosol, mitochondrion | 29.13 | 55.43 |
| HORVU3Hr1G016090.4 | Barley | peroxisome | 39.04 | 51.38 |
| CDY08961 | Canola | plastid | 16.82 | 39.72 |
| Bra003552.1-P | Field mustard | cytosol | 18.02 | 38.71 |
| CDY48184 | Canola | cytosol | 18.02 | 37.74 |
| CDY67953 | Canola | cytosol | 21.32 | 34.13 |
| Bra023205.1-P | Field mustard | cytosol | 21.62 | 33.49 |
| CDY68016 | Canola | cytosol | 18.32 | 27.73 |
| CDY31910 | Canola | nucleus | 21.62 | 25.9 |
| Zm00001d034640_P003 | Maize | cytosol, extracellular | 25.83 | 16.26 |
| Zm00001d012969_P008 | Maize | cytosol | 25.83 | 16.23 |
Protein Annotations
| EMBL:BT040399 | EnsemblPlants:Zm00001d049163_P001 | EnsemblPlants:Zm00001d049163_T001 | EnsemblPlantsGene:Zm00001d049163 | EntrezGene:100284284 | Gene3D:3.40.50.720 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008641 | InterPro:ThiF_NAD_FAD-bd | InterPro:Ubiquitin-activating_enz | PANTHER:PTHR10953 |
| PANTHER:PTHR10953:SF162 | PFAM:PF00899 | ProteinID:AQK49753.1 | SEG:seg | SUPFAM:SSF69572 | UniParc:UPI00017B7601 |
| UniProt:B4FTG1 | MapMan:19.2.2.2.2.1 | : | : | : | : |
Description
SUMO-activating enzyme subunit 1B-2
Coordinates
chr4:-:18563496..18569761
Molecular Weight (calculated)
36499.9 Da
IEP (calculated)
5.039
GRAVY (calculated)
-0.208
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGGGAGGA EGELTAQETA LYDRQIRVWG VDAQKRLSKA HVLVCGMNGT TIEFCKNIVL AGVGSLSLMD DNVVTEEDLN ANFLIPPDES IYGGRSRAQV
101: CCESLIDFNP MVRVFVEKGD PSLIDGEFLD KFDIVVLSRA SLKTKLLINE NCRKRSKHIA FYTIDCKDSC GEIFVDLQKH SYVQKKPGGA TEQQELTYSS
201: LQEAISVPWN SLPKKTAKLY FAMRVLEDYE LSEGRSPGET TLSDIDAVLA RRKDMCDKMS LNESRIPTTL VERLLAAGKK EHPPVCAILG GILGQEVIKS
301: ISCKGDPVKN FFYFDVADGK GVIEDIPPPP PAK
101: CCESLIDFNP MVRVFVEKGD PSLIDGEFLD KFDIVVLSRA SLKTKLLINE NCRKRSKHIA FYTIDCKDSC GEIFVDLQKH SYVQKKPGGA TEQQELTYSS
201: LQEAISVPWN SLPKKTAKLY FAMRVLEDYE LSEGRSPGET TLSDIDAVLA RRKDMCDKMS LNESRIPTTL VERLLAAGKK EHPPVCAILG GILGQEVIKS
301: ISCKGDPVKN FFYFDVADGK GVIEDIPPPP PAK
001: MDGEELTEQE TALYDRQIRV WGANAQRRLT KAHILVSGIK GTVAEFCKNI VLAGVGSVTL MDDRLANMEA LNANFLIPPD ENVYSGKTVA EICSDSLKDF
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS
Arabidopsis Description
SAE1ASUMO-activating enzyme subunit 1A [Source:UniProtKB/Swiss-Prot;Acc:Q8VY78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.