Factsheet for HORVU7Hr1G089410.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G077710.3
HORVU7Hr1G036470.3
HORVU7Hr1G036500.7
HORVU7Hr1G036540.3
HORVU7Hr1G036570.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G50680.1	HORVU6Hr1G077710.3	AT4G25200.1	21798944
AT5G50680.1	HORVU7Hr1G036470.3	AT4G25200.1	21798944
AT5G50680.1	HORVU7Hr1G036500.7	AT4G25200.1	21798944
AT5G50680.1	HORVU7Hr1G036540.3	AT4G25200.1	21798944
AT5G50680.1	HORVU7Hr1G036570.2	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G352700.2	Wheat	cytosol	81.2	94.53
TraesCS7D01G370300.1	Wheat	cytosol	81.2	93.67
TraesCS7B01G275300.1	Wheat	cytosol	76.76	88.82
Os11t0497000-01	Rice	cytosol	71.02	82.93
Zm00001d049163_P001	Maize	cytosol, extracellular	71.02	81.68
EES08513	Sorghum	cytosol	71.28	81.49
HORVU2Hr1G027820.1	Barley	cytosol	17.23	73.33
GSMUA_AchrUn_...	Banana	cytosol	55.09	65.33
HORVU3Hr1G016010.1	Barley	cytosol, plastid	77.02	63.3
VIT_17s0000g01270.t01	Wine grape	cytosol	53.0	62.85
PGSC0003DMT400039493	Potato	cytosol	51.96	61.61
KRH59806	Soybean	cytosol, nucleus	52.48	60.73
PGSC0003DMT400069346	Potato	cytosol	50.65	60.62
KRH41120	Soybean	nucleus	44.13	60.14
Solyc06g072080.2.1	Tomato	cytosol	49.87	60.06
CDY34327	Canola	cytosol	50.13	59.63
Bra013848.1-P	Field mustard	cytosol	50.13	59.63
CDX93356	Canola	cytosol	49.61	59.01
CDX92842	Canola	cytosol	49.61	59.01
CDY03404	Canola	cytosol	49.61	59.01
HORVU3Hr1G016090.4	Barley	peroxisome	38.9	58.89
AT5G50680.1	Thale cress	cytosol	48.83	58.44
AT5G50580.2	Thale cress	cytosol	48.83	58.44
Solyc03g019730.2.1	Tomato	mitochondrion	52.48	58.09
AT4G24940.1	Thale cress	cytosol	48.83	58.07
CDY08955	Canola	cytosol	15.67	56.6
CDY08954	Canola	cytosol, mitochondrion	24.28	53.14
Bra003552.1-P	Field mustard	cytosol	16.71	41.29
CDY48184	Canola	cytosol	16.71	40.25
CDY08961	Canola	plastid	13.58	36.88
CDY67953	Canola	cytosol	19.84	36.54
Bra023205.1-P	Field mustard	cytosol	19.84	35.35
HORVU3Hr1G105710.1	Barley	cytosol, nucleus	5.74	30.56
CDY68016	Canola	cytosol	15.93	27.73
CDY31910	Canola	nucleus	20.1	27.7
HORVU5Hr1G081370.10	Barley	cytosol, nucleus, plastid	22.45	14.6

Protein Annotations

EnsemblPlants:HORVU7Hr1G089410.1	EnsemblPlantsGene:HORVU7Hr1G089410	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008641	GO:GO:0009987	GO:GO:0019538	InterPro:ThiF_NAD_FAD-bd
InterPro:UBQ/SUMO-activ_enz_E1-like	InterPro:Ubiquitin-activating_enz	PANTHER:PTHR10953	PANTHER:PTHR10953:SF162	PFAM:PF00899	PRINTS:PR01849
SEG:seg	SUPFAM:SSF69572	UniParc:UPI000B46B0E1	UniProt:A0A287X8Y6	MapMan:19.2.2.2.2.1	:

Description

No Description!

Coordinates

chrchr7H:+:542851322..542858437

Molecular Weight (calculated)

42422.7 Da

IEP (calculated)

7.085

GRAVY (calculated)

-0.440

Length

383 amino acids

Sequence
(BLAST)

001: RTRPAKRGKR EKYPHFLREP QNPRGYSPSS FPFSGCLPDS PRRLGIRAFR AMAGGDGDGG AVEELTAQET ALYDRQIRVW GVDAQKRLSK AHVLVCGVNG
101: TTIEFCKNIV LAGVGSLSLM DDHVVTEDDL NSNFLIPHDE SMYGGKSRAE VCCESLKDFN PMVRVAVAKG DPSLNDGTFI DRFDIIVVSC ASLKTKLFIN
201: DNCRKRSKHI AFYSVECKDS CGEIFVDLQN HSYLQKKPGG EPEQQELKYP SLQEAISVPW KDLSKKTTKL YYAMRVLESY ESSEGRDPGE TSLSDLPALL
301: ARKKDMCDRM SLDESKVPTS LLERLLAAGK KEHPPVCAIL GGILGQEVIK SISCKGNPIK NFFYFDAADG KGVMEDIPPT PED

Best Arabidopsis Sequence Match ( AT4G24940.1 )
(BLAST)

001: MDGEELTEQE TALYDRQIRV WGANAQRRLT KAHILVSGIK GTVAEFCKNI VLAGVGSVTL MDDRLANMEA LNANFLIPPD ENVYSGKTVA EICSDSLKDF
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS

Arabidopsis Description

SAE1ASUMO-activating enzyme subunit 1A [Source:UniProtKB/Swiss-Prot;Acc:Q8VY78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.