Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr10P... |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G50680.1 | GSMUA_Achr10P... | AT4G25200.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g01270.t01 | Wine grape | cytosol | 72.76 | 72.76 |
| PGSC0003DMT400039493 | Potato | cytosol | 69.04 | 69.04 |
| KRH41120 | Soybean | nucleus | 59.75 | 68.68 |
| PGSC0003DMT400069346 | Potato | cytosol | 67.49 | 68.12 |
| Solyc06g072080.2.1 | Tomato | cytosol | 66.25 | 67.3 |
| Os11t0497000-01 | Rice | cytosol | 67.8 | 66.77 |
| KRH59806 | Soybean | cytosol, nucleus | 67.49 | 65.86 |
| EES08513 | Sorghum | cytosol | 68.11 | 65.67 |
| Zm00001d049163_P001 | Maize | cytosol, extracellular | 66.87 | 64.86 |
| Solyc03g019730.2.1 | Tomato | mitochondrion | 69.04 | 64.45 |
| TraesCS3D01G090000.1 | Wheat | cytosol | 65.63 | 63.86 |
| CDY34327 | Canola | cytosol | 63.47 | 63.66 |
| CDX93356 | Canola | cytosol | 63.47 | 63.66 |
| CDX92842 | Canola | cytosol | 63.47 | 63.66 |
| Bra013848.1-P | Field mustard | cytosol | 63.47 | 63.66 |
| TraesCS3B01G105300.2 | Wheat | cytosol | 65.33 | 63.55 |
| CDY03404 | Canola | cytosol | 63.16 | 63.35 |
| TraesCS7A01G352700.2 | Wheat | cytosol | 64.4 | 63.22 |
| CDY08955 | Canola | cytosol | 20.74 | 63.21 |
| TraesCS3A01G090000.1 | Wheat | cytosol | 64.71 | 62.95 |
| TraesCS7D01G370300.1 | Wheat | cytosol | 64.71 | 62.95 |
| AT5G50580.2 | Thale cress | cytosol | 62.23 | 62.81 |
| AT5G50680.1 | Thale cress | cytosol | 62.23 | 62.81 |
| AT4G24940.1 | Thale cress | cytosol | 61.92 | 62.11 |
| TraesCS7B01G275300.1 | Wheat | cytosol | 60.06 | 58.61 |
| CDY08954 | Canola | cytosol, mitochondrion | 31.27 | 57.71 |
| HORVU2Hr1G027820.1 | Barley | cytosol | 15.48 | 55.56 |
| HORVU7Hr1G089410.1 | Barley | cytosol, mitochondrion, nucleus | 65.33 | 55.09 |
| Bra003552.1-P | Field mustard | cytosol | 21.98 | 45.81 |
| HORVU3Hr1G016010.1 | Barley | cytosol, plastid | 65.63 | 45.49 |
| CDY48184 | Canola | cytosol | 21.98 | 44.65 |
| HORVU3Hr1G016090.4 | Barley | peroxisome | 33.75 | 43.08 |
| CDY08961 | Canola | plastid | 17.65 | 40.43 |
| CDY67953 | Canola | cytosol | 24.77 | 38.46 |
| Bra023205.1-P | Field mustard | cytosol | 24.46 | 36.74 |
| CDY31910 | Canola | nucleus | 25.7 | 29.86 |
| CDY68016 | Canola | cytosol | 18.89 | 27.73 |
| GSMUA_Achr5P02360_001 | Banana | cytosol | 23.22 | 14.2 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP19980_001 | EnsemblPlants:GSMUA_AchrUn_randomT19980_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG19980_001 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008641 | InterPro:ThiF_NAD_FAD-bd | InterPro:Ubiquitin-activating_enz | PANTHER:PTHR10953 | PANTHER:PTHR10953:SF162 | PFAM:PF00899 |
| SUPFAM:SSF69572 | UniParc:UPI000296E5B9 | UniProt:M0UAQ7 | MapMan:19.2.2.2.2.1 | : | : |
Description
SUMO-activating enzyme subunit 1A [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG19980_001]
Coordinates
chrchrUn_random:-:97142988..97151437
Molecular Weight (calculated)
36033.5 Da
IEP (calculated)
4.854
GRAVY (calculated)
-0.140
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGEELTAQQ TALYDRQIRV WGVDAQKRLS KAQILVSGLN GTSVEFCKNI VLAGVGSLTL MDDRLVTEDA LQANFLIPRD ETVYSGRSLS ELCCESLRDF
101: NPMVRVLAEK GDLAQCEMEF LDKFDVVVVT GCSLKTKIEI NEKCRKRAKR IAFYAIECRD SCGEIFVDLQ NYTYAQKKSD GTAECHLSYP SLEDAILIPW
201: RNLPRKVSKL YFAMRVIEKF ELSEGRNPGE LSNFDLPAVL KQRKELCDAQ SLNESHVPET LLERILVAGP MLYPPVCPIL GGILGQEVIK AISGKGDPLK
301: NFFYFDAADG KGVIEDISNP SSI
101: NPMVRVLAEK GDLAQCEMEF LDKFDVVVVT GCSLKTKIEI NEKCRKRAKR IAFYAIECRD SCGEIFVDLQ NYTYAQKKSD GTAECHLSYP SLEDAILIPW
201: RNLPRKVSKL YFAMRVIEKF ELSEGRNPGE LSNFDLPAVL KQRKELCDAQ SLNESHVPET LLERILVAGP MLYPPVCPIL GGILGQEVIK AISGKGDPLK
301: NFFYFDAADG KGVIEDISNP SSI
001: MDGEELTEQE TALYDRQIRV WGANAQRRLT KAHILVSGIK GTVAEFCKNI VLAGVGSVTL MDDRLANMEA LNANFLIPPD ENVYSGKTVA EICSDSLKDF
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS
Arabidopsis Description
SAE1ASUMO-activating enzyme subunit 1A [Source:UniProtKB/Swiss-Prot;Acc:Q8VY78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.