Factsheet for AT5G50580.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G50680.1	Thale cress	cytosol	100.0	100.0
AT4G24940.1	Thale cress	cytosol	79.06	78.57
VIT_17s0000g01270.t01	Wine grape	cytosol	72.5	71.83
KRH41120	Soybean	nucleus	61.56	70.11
KRH59806	Soybean	cytosol, nucleus	70.62	68.28
PGSC0003DMT400069346	Potato	cytosol	67.81	67.81
PGSC0003DMT400039493	Potato	cytosol	68.44	67.8
Solyc06g072080.2.1	Tomato	cytosol	64.69	65.09
Solyc03g019730.2.1	Tomato	mitochondrion	67.81	62.72
GSMUA_AchrUn_...	Banana	cytosol	62.81	62.23
Os11t0497000-01	Rice	cytosol	59.06	57.62
EES08513	Sorghum	cytosol	60.0	57.31
Zm00001d049163_P001	Maize	cytosol, extracellular	59.38	57.06
TraesCS7D01G370300.1	Wheat	cytosol	58.75	56.63
TraesCS7A01G352700.2	Wheat	cytosol	58.12	56.53
TraesCS3A01G090000.1	Wheat	cytosol	56.88	54.82
TraesCS3B01G105300.2	Wheat	cytosol	56.56	54.52
TraesCS3D01G090000.1	Wheat	cytosol	56.25	54.22
TraesCS7B01G275300.1	Wheat	cytosol	54.06	52.27
HORVU2Hr1G027820.1	Barley	cytosol	13.75	48.89
HORVU7Hr1G089410.1	Barley	cytosol, mitochondrion, nucleus	58.44	48.83
HORVU3Hr1G016010.1	Barley	cytosol, plastid	57.19	39.27
HORVU3Hr1G016090.4	Barley	peroxisome	29.38	37.15
AT3G25880.2	Thale cress	cytosol	5.62	24.32
AT1G05180.1	Thale cress	cytosol	23.12	13.7
AT2G32410.1	Thale cress	nucleus	22.19	13.58

Protein Annotations

MapMan:19.2.2.2.2.1	Gene3D:3.40.50.720	EntrezGene:835127	EntrezGene:835139	ProteinID:AED95964.1	ProteinID:AED95965.1
ProteinID:AED95978.1	ProteinID:AED95979.1	EMBL:AF510524	EMBL:AK227039	ArrayExpress:AT5G50580	EnsemblPlantsGene:AT5G50580
RefSeq:AT5G50580	TAIR:AT5G50580	RefSeq:AT5G50580-TAIR-G	EnsemblPlants:AT5G50580.2	TAIR:AT5G50580.2	EMBL:AY086686
EMBL:AY091012	EMBL:AY117230	Unigene:At.7138	ProteinID:BAA96981.1	ProteinID:BAB09143.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008641
GO:GO:0009987	GO:GO:0016874	GO:GO:0016925	GO:GO:0019538	GO:GO:0019948	RefSeq:NP_001032050.1
RefSeq:NP_568732.2	RefSeq:NP_568741.1	RefSeq:NP_851162.1	UniProt:P0DI12	UniProt:P0DI13	PFAM:PF00899
PO:PO:0000003	PO:PO:0000293	PRINTS:PR01849	PANTHER:PTHR10953	PANTHER:PTHR10953:SF162	Symbol:SAE1B
SUPFAM:SSF69572	InterPro:ThiF_NAD_FAD-bd	InterPro:UBQ/SUMO-activ_enz_E1-like	UniParc:UPI00000A783E	InterPro:Ubiquitin-activating_enz	:

Description

SAE1B-2SUMO-activating enzyme subunit 1B-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DI12]

Coordinates

chr5:+:20585349..20587761

Molecular Weight (calculated)

35656.8 Da

IEP (calculated)

4.889

GRAVY (calculated)

-0.141

Length

320 amino acids

Sequence
(BLAST)

001: MDGDELTEQE TALYDRQIRV WGAGAQRRLS KSHVLVSGIK GTVAEFCKNI VLAGVGSVTL LDDRLVTTEV FNANFLILPD ENAYVGKTVA EICCDSLKDF
101: NPMVHVSIEK GDLSTLGVDF FEKFDVVVIG YSSRATKKAV NEKCRNLAKD VAFYTVDCRG SCGEIFVDLQ NYKYTKKKLD ETVECELTFP SFEEAVSVPW
201: KPMPRRTAKL YFAMRVIELF EETEGRKPGE CSLSDLPRVL KLKKELCEGN SVSENHIPDI LLERLVSNNT EFPPACAIIG GILGQEVIKV ISGKGEPLKN
301: FFYFDAEDGK GVIEDLSHKL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.