Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003552.1-P | Field mustard | cytosol | 44.44 | 25.81 |
| CDY48184 | Canola | cytosol | 44.44 | 25.16 |
| TraesCS3A01G090000.1 | Wheat | cytosol | 82.22 | 22.29 |
| TraesCS3B01G105300.2 | Wheat | cytosol | 80.0 | 21.69 |
| TraesCS3D01G090000.1 | Wheat | cytosol | 77.78 | 21.08 |
| Os11t0497000-01 | Rice | cytosol | 72.22 | 19.82 |
| CDY67953 | Canola | cytosol | 45.56 | 19.71 |
| Bra023205.1-P | Field mustard | cytosol | 46.67 | 19.53 |
| Zm00001d049163_P001 | Maize | cytosol, extracellular | 71.11 | 19.22 |
| EES08513 | Sorghum | cytosol | 71.11 | 19.1 |
| CDY08954 | Canola | cytosol, mitochondrion | 36.67 | 18.86 |
| HORVU7Hr1G089410.1 | Barley | cytosol, mitochondrion, nucleus | 73.33 | 17.23 |
| CDY68016 | Canola | cytosol | 41.11 | 16.82 |
| HORVU3Hr1G016010.1 | Barley | cytosol, plastid | 84.44 | 16.31 |
| GSMUA_AchrUn_... | Banana | cytosol | 55.56 | 15.48 |
| KRH41120 | Soybean | nucleus | 45.56 | 14.59 |
| VIT_17s0000g01270.t01 | Wine grape | cytosol | 50.0 | 13.93 |
| PGSC0003DMT400039493 | Potato | cytosol | 50.0 | 13.93 |
| Solyc06g072080.2.1 | Tomato | cytosol | 48.89 | 13.84 |
| AT5G50580.2 | Thale cress | cytosol | 48.89 | 13.75 |
| AT5G50680.1 | Thale cress | cytosol | 48.89 | 13.75 |
| PGSC0003DMT400069346 | Potato | cytosol | 48.89 | 13.75 |
| CDY31910 | Canola | nucleus | 42.22 | 13.67 |
| Solyc03g019730.2.1 | Tomato | mitochondrion | 52.22 | 13.58 |
| AT4G24940.1 | Thale cress | cytosol | 46.67 | 13.04 |
| CDX93356 | Canola | cytosol | 45.56 | 12.73 |
| CDX92842 | Canola | cytosol | 45.56 | 12.73 |
| Bra013848.1-P | Field mustard | cytosol | 44.44 | 12.42 |
| CDY34327 | Canola | cytosol | 44.44 | 12.42 |
| CDY03404 | Canola | cytosol | 43.33 | 12.11 |
| KRH59806 | Soybean | cytosol, nucleus | 44.44 | 12.08 |
| HORVU5Hr1G081370.10 | Barley | cytosol, nucleus, plastid | 21.11 | 3.23 |
| HORVU3Hr1G016090.4 | Barley | peroxisome | 8.89 | 3.16 |
| CDY08961 | Canola | plastid | 2.22 | 1.42 |
| HORVU3Hr1G105710.1 | Barley | cytosol, nucleus | 1.11 | 1.39 |
| CDY08955 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G027820.1 | EnsemblPlantsGene:HORVU2Hr1G027820 | Gene3D:3.40.50.720 | SEG:seg | UniParc:UPI000B46C483 | UniProt:A0A287HHG8 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:92973214..92973813
Molecular Weight (calculated)
9180.2 Da
IEP (calculated)
7.258
GRAVY (calculated)
-0.033
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: FAVLESYELS EGRNPGETAL SDLPAILAWR KDMCDRMSLS ESQIPTALLE RLLAAGKKEH PPVCAILGGI LGQSRAFLLA GKGGNKXXXX
001: MDGDELTEQE TALYDRQIRV WGAGAQRRLS KSHVLVSGIK GTVAEFCKNI VLAGVGSVTL LDDRLVTTEV FNANFLILPD ENAYVGKTVA EICCDSLKDF
101: NPMVHVSIEK GDLSTLGVDF FEKFDVVVIG YSSRATKKAV NEKCRNLAKD VAFYTVDCRG SCGEIFVDLQ NYKYTKLDET VECELTFPSF EEAVSVPWKP
201: MPRRTAKLYF AMRVIELFEE TEGRKPGECS LSDLPRVLKL KKELCEGNSV SENHIPDILL ERLVSNNTEF PPACAIIGGI LGQEVIKVIS GKGEPLKNFF
301: YFDAEDGKGV IEDLSHKL
101: NPMVHVSIEK GDLSTLGVDF FEKFDVVVIG YSSRATKKAV NEKCRNLAKD VAFYTVDCRG SCGEIFVDLQ NYKYTKLDET VECELTFPSF EEAVSVPWKP
201: MPRRTAKLYF AMRVIELFEE TEGRKPGECS LSDLPRVLKL KKELCEGNSV SENHIPDILL ERLVSNNTEF PPACAIIGGI LGQEVIKVIS GKGEPLKNFF
301: YFDAEDGKGV IEDLSHKL
Arabidopsis Description
SAE1B-2SUMO-activating enzyme subunit 1B-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DI12]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.