Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_16s0022g00510.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G50680.1 | VIT_16s0022g00510.t01 | AT4G25200.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH41120 | Soybean | nucleus | 66.56 | 76.51 |
| KRH59806 | Soybean | cytosol, nucleus | 76.78 | 74.92 |
| PGSC0003DMT400069346 | Potato | cytosol | 73.06 | 73.75 |
| PGSC0003DMT400039493 | Potato | cytosol | 73.06 | 73.06 |
| GSMUA_AchrUn_... | Banana | cytosol | 72.76 | 72.76 |
| AT5G50580.2 | Thale cress | cytosol | 71.83 | 72.5 |
| AT5G50680.1 | Thale cress | cytosol | 71.83 | 72.5 |
| Solyc06g072080.2.1 | Tomato | cytosol | 71.21 | 72.33 |
| CDY08955 | Canola | cytosol | 23.53 | 71.7 |
| CDY34327 | Canola | cytosol | 70.59 | 70.81 |
| Bra013848.1-P | Field mustard | cytosol | 70.59 | 70.81 |
| CDY03404 | Canola | cytosol | 70.28 | 70.5 |
| CDX93356 | Canola | cytosol | 70.28 | 70.5 |
| CDX92842 | Canola | cytosol | 70.28 | 70.5 |
| AT4G24940.1 | Thale cress | cytosol | 69.35 | 69.57 |
| Solyc03g019730.2.1 | Tomato | mitochondrion | 72.45 | 67.63 |
| Os11t0497000-01 | Rice | cytosol | 62.85 | 61.89 |
| TraesCS7D01G370300.1 | Wheat | cytosol | 63.16 | 61.45 |
| Zm00001d049163_P001 | Maize | cytosol, extracellular | 62.85 | 60.96 |
| EES08513 | Sorghum | cytosol | 62.85 | 60.6 |
| CDY08954 | Canola | cytosol, mitochondrion | 32.82 | 60.57 |
| TraesCS7A01G352700.2 | Wheat | cytosol | 61.61 | 60.49 |
| TraesCS3A01G090000.1 | Wheat | cytosol | 61.61 | 59.94 |
| TraesCS3B01G105300.2 | Wheat | cytosol | 61.61 | 59.94 |
| TraesCS3D01G090000.1 | Wheat | cytosol | 61.61 | 59.94 |
| TraesCS7B01G275300.1 | Wheat | cytosol | 58.2 | 56.8 |
| HORVU7Hr1G089410.1 | Barley | cytosol, mitochondrion, nucleus | 62.85 | 53.0 |
| HORVU2Hr1G027820.1 | Barley | cytosol | 13.93 | 50.0 |
| CDY08961 | Canola | plastid | 19.2 | 43.97 |
| HORVU3Hr1G016010.1 | Barley | cytosol, plastid | 61.61 | 42.7 |
| HORVU3Hr1G016090.4 | Barley | peroxisome | 32.51 | 41.5 |
| VIT_12s0059g00610.t01 | Wine grape | cytosol | 24.15 | 14.91 |
Protein Annotations
| EntrezGene:100268076 | wikigene:100268076 | MapMan:19.2.2.2.2.1 | Gene3D:3.40.50.720 | ProteinID:CBI15678 | ProteinID:CBI15678.3 |
| UniProt:D7SGZ8 | EMBL:FN594950 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008641 |
| GO:GO:0009987 | GO:GO:0016925 | GO:GO:0019538 | GO:GO:0019948 | EntrezGene:LOC100268076 | wikigene:LOC100268076 |
| PFAM:PF00899 | PANTHER:PTHR10953 | PANTHER:PTHR10953:SF162 | SUPFAM:SSF69572 | TIGR:TC65486 | InterPro:ThiF_NAD_FAD-bd |
| UniParc:UPI00015C9F2E | InterPro:Ubiquitin-activating_enz | ArrayExpress:VIT_17s0000g01270 | EnsemblPlantsGene:VIT_17s0000g01270 | EnsemblPlants:VIT_17s0000g01270.t01 | unigene:Vvi.2246 |
| RefSeq:XP_002283880 | RefSeq:XP_002283880.1 | : | : | : | : |
Description
No Description!
Coordinates
chr17:+:914165..918766
Molecular Weight (calculated)
35927.9 Da
IEP (calculated)
4.593
GRAVY (calculated)
-0.186
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGEELTEQE TALYDRQIRV WGVDAQRRLS KAHILVSGMK GTVVEFCKNI VLAGVGSLTL VDSREVTEEA LSANFLIPPD ENVYSGKTLA ELCCDSLKDF
101: NPMVRVSVEK GDISSFGGDF YDRFDVVVIS SCSFATKKLI NEKCRKVSKR IAFYTVDCRD SCGEIYVDLQ NYTYSKKKLD ETDECQLQYP SFEEAVTIPW
201: RALPKKVTKL YLAMRVIERF EEAEGRNPGE ISIADLPGVL KLKKELCEAQ SFNESHVPDA LLERLVSDTS EFPPVCAILG GILGQEVIKA ISGKGDPLKN
301: FFFFDAIDGK GIIEDISNPN PGS
101: NPMVRVSVEK GDISSFGGDF YDRFDVVVIS SCSFATKKLI NEKCRKVSKR IAFYTVDCRD SCGEIYVDLQ NYTYSKKKLD ETDECQLQYP SFEEAVTIPW
201: RALPKKVTKL YLAMRVIERF EEAEGRNPGE ISIADLPGVL KLKKELCEAQ SFNESHVPDA LLERLVSDTS EFPPVCAILG GILGQEVIKA ISGKGDPLKN
301: FFFFDAIDGK GIIEDISNPN PGS
001: MDGDELTEQE TALYDRQIRV WGAGAQRRLS KSHVLVSGIK GTVAEFCKNI VLAGVGSVTL LDDRLVTTEV FNANFLILPD ENAYVGKTVA EICCDSLKDF
101: NPMVHVSIEK GDLSTLGVDF FEKFDVVVIG YSSRATKKAV NEKCRNLAKD VAFYTVDCRG SCGEIFVDLQ NYKYTKKKLD ETVECELTFP SFEEAVSVPW
201: KPMPRRTAKL YFAMRVIELF EETEGRKPGE CSLSDLPRVL KLKKELCEGN SVSENHIPDI LLERLVSNNT EFPPACAIIG GILGQEVIKV ISGKGEPLKN
301: FFYFDAEDGK GVIEDLSHKL
101: NPMVHVSIEK GDLSTLGVDF FEKFDVVVIG YSSRATKKAV NEKCRNLAKD VAFYTVDCRG SCGEIFVDLQ NYKYTKKKLD ETVECELTFP SFEEAVSVPW
201: KPMPRRTAKL YFAMRVIELF EETEGRKPGE CSLSDLPRVL KLKKELCEGN SVSENHIPDI LLERLVSNNT EFPPACAIIG GILGQEVIKV ISGKGEPLKN
301: FFYFDAEDGK GVIEDLSHKL
Arabidopsis Description
SAE1B-2SUMO-activating enzyme subunit 1B-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DI12]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.