Factsheet for VIT_12s0059g00610.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56132	Soybean	cytosol	84.13	84.13
KRH25373	Soybean	cytosol	82.79	82.79
Solyc12g005870.1.1	Tomato	cytosol	78.59	82.2
PGSC0003DMT400070486	Potato	cytosol	83.17	81.01
Solyc11g072460.1.1	Tomato	cytosol	82.6	80.45
Bra015396.1-P	Field mustard	nucleus	75.72	79.36
Bra032482.1-P	Field mustard	cytosol	71.13	77.82
Bra005592.1-P	Field mustard	cytosol	75.53	75.24
GSMUA_Achr5P02360_001	Banana	cytosol	74.95	74.24
Os03t0820100-01	Rice	cytosol	70.75	69.68
KXG37258	Sorghum	cytosol	69.6	68.81
TraesCS5A01G318500.3	Wheat	cytosol	69.6	68.68
Zm00001d034640_P003	Maize	cytosol, extracellular	69.22	68.43
TraesCS5B01G489700.1	Wheat	cytosol	67.3	67.56
Zm00001d012969_P008	Maize	cytosol	68.45	67.55
TraesCS5A01G476800.1	Wheat	cytosol	67.69	66.79
HORVU3Hr1G105710.1	Barley	cytosol, nucleus	9.18	66.67
TraesCS5D01G490100.3	Wheat	plastid	67.3	65.06
Bra020995.1-P	Field mustard	cytosol	14.72	64.71
CDY49508	Canola	cytosol	39.58	64.69
TraesCS5B01G319000.2	Wheat	golgi	69.98	63.99
TraesCS5D01G324800.3	Wheat	mitochondrion	69.6	62.76
HORVU5Hr1G081370.10	Barley	cytosol, nucleus, plastid	69.79	61.97
AT3G25880.2	Thale cress	cytosol	8.6	60.81
VIT_17s0000g01270.t01	Wine grape	cytosol	14.91	24.15

Protein Annotations

EntrezGene:100251665	wikigene:100251665	MapMan:19.2.2.3.3.2	Gene3D:3.40.50.720	InterPro:APP-BP1	ProteinID:CBI28798
ProteinID:CBI28798.3	UniProt:D7TE75	EMBL:FN595765	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0008641	GO:GO:0009987	GO:GO:0019538	GO:GO:0019781	GO:GO:0045116	EntrezGene:LOC100251665
wikigene:LOC100251665	PFAM:PF00899	PIRSF:PIRSF039099	PANTHER:PTHR10953	PANTHER:PTHR10953:SF29	SUPFAM:SSF69572
TIGR:TC57102	TIGR:TC64503	InterPro:ThiF_NAD_FAD-bd	UniParc:UPI00015CA9F8	InterPro:Ubiquitin-activating_enz	ArrayExpress:VIT_12s0059g00610
EnsemblPlantsGene:VIT_12s0059g00610	EnsemblPlants:VIT_12s0059g00610.t01	unigene:Vvi.12538	RefSeq:XP_002267415	RefSeq:XP_002267415.1	RefSeq:XP_010657199.1
SEG:seg	:	:	:	:	:

Description

NEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:D7TE75]

Coordinates

chr12:+:5449824..5464118

Molecular Weight (calculated)

58237.6 Da

IEP (calculated)

4.878

GRAVY (calculated)

-0.195

Length

523 amino acids

Sequence
(BLAST)

001: MAEPKTKYDR QLRIWGEQGQ EALEKASICL LNCGPTGSET LKNLVLGGIG SITVIDGSKV ELGDLGNNFM VDESSIGQSK AKCVCASLQE LNDAVKAKFI
101: EEYPEALIET NPSFFSQFTL VIATQLVEDS MIKLDRICRE ANVMLIFARS YGLTGFVRIS LKEHAVIESK PDHFLDDLRL NNPWPELRGF AETIDLNVSD
201: PVVHKHTPYV VILVKMAEQW TKSHDGKLPS TREEKKEFKD LLKSKMIAMD EDNYKEAIEA SFKVFAPRGI SSNLQQIIDD SRADVDSSSS NFWVMVASLK
301: EFIANEGGGE APLEGSIPDM TSSTEHYVNL QKIYQAKAEA DFLVIEQRVR NILKKIGRDP DSISKANIKS FSKNARKLTV CRYRLLEEEF NSPIQPELQK
401: YLTDEDYSVA VGFYILLRAV DRFAANYNSF PGQFDGGMDE DISRLKTTAV SLLSDLGCNG STLTEDLINE MCRFGAAELH AVAAFIGGIA SQEVIKLITK
501: QFVPMSGTFI FNGIDHKSQL LSL

Best Arabidopsis Sequence Match ( AT1G05180.1 )
(BLAST)

001: MQAVKRSRRH VEEEPTMVEP KTKYDRQLRI WGEVGQAALE EASICLLNCG PTGSEALKNL VLGGVGSITV VDGSKVQFGD LGNNFMVDAK SVGQSKAKSV
101: CAFLQELNDS VNAKFIEENP DTLITTNPSF FSQFTLVIAT QLVEDSMLKL DRICRDANVK LVLVRSYGLA GFVRISVKEH PIIDSKPDHF LDDLRLNNPW
201: PELKSFVETI DLNVSEPAAA HKHIPYVVIL VKMAEEWAQS HSGNLPSTRE EKKEFKDLVK SKMVSTDEDN YKEAIEAAFK VFAPRGISSE VQKLINDSCA
301: EVNSNSSAFW VMVAALKEFV LNEGGGEAPL EGSIPDMTSS TEHYINLQKI YLAKAEADFL VIEERVKNIL KKIGRDPSSI PKPTIKSFCK NARKLKLCRY
401: RMVEDEFRNP SVTEIQKYLA DEDYSGAMGF YILLRAADRF AANYNKFPGQ FDGGMDEDIS RLKTTALSLL TDLGCNGSVL PDDLIHEMCR FGASEIHVVS
501: AFVGGIASQE VIKLVTKQFV PMLGTYIFNG IDHKSQLLKL

Arabidopsis Description

AXR1NEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WFT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.