CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88903
EES13692

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05180.1	EER88903	AT4G36800.1	12682009
AT1G05180.1	EES13692	AT4G36800.1	12682009

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012969_P008	Maize	cytosol	95.84	95.66
HORVU3Hr1G105710.1	Barley	cytosol, nucleus	12.29	90.28
TraesCS5A01G476800.1	Wheat	cytosol	87.52	87.36
TraesCS5A01G318500.3	Wheat	cytosol	87.52	87.36
TraesCS5B01G489700.1	Wheat	cytosol	86.01	87.33
Os03t0820100-01	Rice	cytosol	87.52	87.19
TraesCS5D01G490100.3	Wheat	plastid	87.15	85.21
TraesCS5B01G319000.2	Wheat	golgi	86.96	80.42
TraesCS5D01G324800.3	Wheat	mitochondrion	87.33	79.66
HORVU5Hr1G081370.10	Barley	cytosol, nucleus, plastid	88.09	79.12
GSMUA_Achr5P02360_001	Banana	cytosol	72.59	72.73
VIT_12s0059g00610.t01	Wine grape	cytosol	68.81	69.6
KRH56132	Soybean	cytosol	67.67	68.45
Bra015396.1-P	Field mustard	nucleus	64.27	68.14
CDY46837	Canola	nucleus	67.3	68.07
KRH25373	Soybean	cytosol	67.11	67.88
CDY55450	Canola	cytosol	66.73	67.75
CDY49510	Canola	cytosol	66.54	67.3
CDY15536	Canola	cytosol	66.16	67.18
Solyc12g005870.1.1	Tomato	cytosol	62.76	66.4
CDY06162	Canola	cytosol	64.65	66.28
PGSC0003DMT400070486	Potato	cytosol	66.92	65.92
Bra032482.1-P	Field mustard	cytosol	59.36	65.69
Solyc11g072460.1.1	Tomato	cytosol	66.54	65.55
AT1G05180.1	Thale cress	cytosol	66.73	65.37
AT2G32410.1	Thale cress	nucleus	64.46	65.2
Bra005592.1-P	Field mustard	cytosol	64.65	65.14
CDY48269	Canola	cytosol	64.27	64.76
CDY12209	Canola	cytosol	64.84	64.23
CDY10045	Canola	cytosol	57.66	63.54
CDY31150	Canola	cytosol	12.1	61.54
CDX98913	Canola	cytosol	12.1	61.54
Bra020995.1-P	Field mustard	cytosol	13.04	57.98
AT3G25880.2	Thale cress	cytosol	7.75	55.41
CDX81957	Canola	cytosol	11.72	54.87
CDY49508	Canola	cytosol	32.89	54.38
CDX97381	Canola	extracellular	18.34	45.33
EES08513	Sorghum	cytosol	15.88	25.07

Protein Annotations

MapMan:19.2.2.3.3.2	Gene3D:3.40.50.720	UniProt:A0A1B6QH59	InterPro:APP-BP1	GO:GO:0003674	GO:GO:0003824
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008641	GO:GO:0009987	GO:GO:0019538
GO:GO:0019781	GO:GO:0045116	EnsemblPlants:KXG37258	ProteinID:KXG37258	ProteinID:KXG37258.1	PFAM:PF00899
PIRSF:PIRSF039099	PANTHER:PTHR10953	PANTHER:PTHR10953:SF29	EnsemblPlantsGene:SORBI_3001G035200	SUPFAM:SSF69572	InterPro:ThiF_NAD_FAD-bd
UniParc:UPI0001C80C49	InterPro:Ubiquitin-activating_enz	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:2649480..2657771

Molecular Weight (calculated)

59008.6 Da

IEP (calculated)

5.059

GRAVY (calculated)

-0.133

Length

529 amino acids

Sequence
(BLAST)

001: MAATGVVAEP KTKYDRQLRI WGDQGQAALE KASICLLNCG PTGTEALKNL VLGGIGSVTV VDGSKVEASD LGNNFLLDEG CLGQPRAKSI CSFLQELNDA
101: VKAKFVEEFP AHLIDTNPSF FSQFTVVIAT QLPESSLLKL DDICRKADIV LVAARSYGLT GLVRVSVKEH CVIESKPDHF LDDLRLHNPW TELKQFAKSI
201: DINDKDPVVH KHTPYIVILV RLAEKWADAH DGNMPSTRQE KKEFKDLIRA HMLNIDEENY KEAVDSSYKV SVTPGISNEI RQIIDDDSAE VNSSSSDFWI
301: LVAALKEFIA KEGNGELPLE GTIPDMTSLT EYYVSLQKIY QAKAEFDCLA LEHHVKEILK RIGRDPDSIS RAYIKTFCKN SRKLRICRYR SFEEEFSSPM
401: VSEIQRYFTD EDYSYAMNFY ILLRAVDRLA ANYSRLPGVF DSEIDEDIPR LKTVAASVLS EMGLNGASLS EDLITEMCRF GGAEIHPVAA FVGGVASQEV
501: IKLVTKQFVP LRGTFIFNGI DLKSQVLVL

Best Arabidopsis Sequence Match ( AT1G05180.1 )
(BLAST)

001: MQAVKRSRRH VEEEPTMVEP KTKYDRQLRI WGEVGQAALE EASICLLNCG PTGSEALKNL VLGGVGSITV VDGSKVQFGD LGNNFMVDAK SVGQSKAKSV
101: CAFLQELNDS VNAKFIEENP DTLITTNPSF FSQFTLVIAT QLVEDSMLKL DRICRDANVK LVLVRSYGLA GFVRISVKEH PIIDSKPDHF LDDLRLNNPW
201: PELKSFVETI DLNVSEPAAA HKHIPYVVIL VKMAEEWAQS HSGNLPSTRE EKKEFKDLVK SKMVSTDEDN YKEAIEAAFK VFAPRGISSE VQKLINDSCA
301: EVNSNSSAFW VMVAALKEFV LNEGGGEAPL EGSIPDMTSS TEHYINLQKI YLAKAEADFL VIEERVKNIL KKIGRDPSSI PKPTIKSFCK NARKLKLCRY
401: RMVEDEFRNP SVTEIQKYLA DEDYSGAMGF YILLRAADRF AANYNKFPGQ FDGGMDEDIS RLKTTALSLL TDLGCNGSVL PDDLIHEMCR FGASEIHVVS
501: AFVGGIASQE VIKLVTKQFV PMLGTYIFNG IDHKSQLLKL

Arabidopsis Description

AXR1NEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WFT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.