Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15536 | Canola | cytosol | 96.74 | 96.74 |
| CDY49510 | Canola | cytosol | 94.05 | 93.69 |
| CDY46837 | Canola | nucleus | 93.86 | 93.5 |
| CDY06162 | Canola | cytosol | 89.25 | 90.12 |
| AT1G05180.1 | Thale cress | cytosol | 88.68 | 85.56 |
| CDY10045 | Canola | cytosol | 78.12 | 84.79 |
| CDX98913 | Canola | cytosol | 16.12 | 80.77 |
| CDY31150 | Canola | cytosol | 16.12 | 80.77 |
| CDY48269 | Canola | cytosol | 80.42 | 79.81 |
| CDY12209 | Canola | cytosol | 81.57 | 79.59 |
| CDY49508 | Canola | cytosol | 46.64 | 75.94 |
| CDX81957 | Canola | cytosol | 16.12 | 74.34 |
| HORVU3Hr1G105710.1 | Barley | cytosol, nucleus | 9.98 | 72.22 |
| GSMUA_Achr5P02360_001 | Banana | cytosol | 69.67 | 68.75 |
| KXG37258 | Sorghum | cytosol | 67.75 | 66.73 |
| Zm00001d034640_P003 | Maize | cytosol, extracellular | 67.18 | 66.16 |
| Os03t0820100-01 | Rice | cytosol | 67.37 | 66.1 |
| TraesCS5B01G489700.1 | Wheat | cytosol | 65.64 | 65.64 |
| Zm00001d012969_P008 | Maize | cytosol | 66.6 | 65.47 |
| TraesCS5A01G318500.3 | Wheat | cytosol | 66.6 | 65.47 |
| TraesCS5A01G476800.1 | Wheat | cytosol | 66.22 | 65.09 |
| TraesCS5D01G490100.3 | Wheat | plastid | 65.64 | 63.22 |
| TraesCS5B01G319000.2 | Wheat | golgi | 66.22 | 60.31 |
| TraesCS5D01G324800.3 | Wheat | mitochondrion | 66.41 | 59.66 |
| CDX97381 | Canola | extracellular | 24.38 | 59.35 |
| HORVU5Hr1G081370.10 | Barley | cytosol, nucleus, plastid | 66.99 | 59.25 |
| CDX92842 | Canola | cytosol | 15.16 | 24.53 |
| CDY34327 | Canola | cytosol | 15.16 | 24.53 |
| CDX93356 | Canola | cytosol | 15.16 | 24.53 |
| CDY03404 | Canola | cytosol | 15.16 | 24.53 |
| CDY48184 | Canola | cytosol | 7.29 | 23.9 |
| CDY08955 | Canola | cytosol | 4.8 | 23.58 |
| CDY08954 | Canola | cytosol, mitochondrion | 7.1 | 21.14 |
| CDY31910 | Canola | nucleus | 9.98 | 18.7 |
| CDY67953 | Canola | cytosol | 7.29 | 18.27 |
| CDY68016 | Canola | cytosol | 7.68 | 18.18 |
| CDY08961 | Canola | plastid | 4.22 | 15.6 |
Protein Annotations
| MapMan:19.2.2.3.3.2 | Gene3D:3.40.50.720 | GO:A0A078J0V0 | UniProt:A0A078J0V0 | InterPro:APP-BP1 | EnsemblPlants:CDY55450 |
| ProteinID:CDY55450 | ProteinID:CDY55450.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008641 | GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019781 | GO:GO:0045116 |
| EnsemblPlantsGene:GSBRNA2T00016852001 | PFAM:PF00899 | PIRSF:PIRSF039099 | PANTHER:PTHR10953 | PANTHER:PTHR10953:SF29 | SUPFAM:SSF69572 |
| InterPro:ThiF_NAD_FAD-bd | UniPathway:UPA00885 | UniParc:UPI0004EE7F68 | InterPro:Ubiquitin-activating_enz | : | : |
Description
BnaC08g46380DNEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A078J0V0]
Coordinates
chrLK033403:+:56754..59965
Molecular Weight (calculated)
57812.2 Da
IEP (calculated)
5.041
GRAVY (calculated)
-0.147
Length
521 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKTKYDRQL RIWGEVGQAA LEEASICLLN CGPTGSEALK NLVLGGVGSI TIVDGSKVEL GDLGNNFMVD ERSVGQSKAK STCAFLQELN DSVKAKFVEE
101: SPDALIMTSP SFFSQFTLVI ATQLVEDSMV KLDRICREAN VKVVFVRSYG LAGLVRVSVK EHTIIDSKPD HFLDDLRLNN PWPELYSFVE TIDLNVSDHV
201: AHKHIPYVVI LVKMADEWTK SHGGNLPSTR EEKKEFKDFV QSKMISMDED NYKEAIEAAF KVFAPRGISS EIQQICNDTC AEPSSNSSDF WVMVAALKEF
301: VSNEGDGEAP LEGSIPDMTS STEHYINLQK IYLAKAEADF LVMEKRVKNI LKRIGRDPSS ISKPTIKSFC KNARKLKVCR YRTVEDEFSN PSVTEIQKCL
401: ADEDYSGAMG FYVLLRAVDR FTANYNKFPG QFDGGMDEDI SRLKTTALSL LADLGCNGSV LPDDLINEMC RFGASELHVV AAFVGGIASQ EVIKLVTKQF
501: VPMLGTYIFN GIDHKSQLLT L
101: SPDALIMTSP SFFSQFTLVI ATQLVEDSMV KLDRICREAN VKVVFVRSYG LAGLVRVSVK EHTIIDSKPD HFLDDLRLNN PWPELYSFVE TIDLNVSDHV
201: AHKHIPYVVI LVKMADEWTK SHGGNLPSTR EEKKEFKDFV QSKMISMDED NYKEAIEAAF KVFAPRGISS EIQQICNDTC AEPSSNSSDF WVMVAALKEF
301: VSNEGDGEAP LEGSIPDMTS STEHYINLQK IYLAKAEADF LVMEKRVKNI LKRIGRDPSS ISKPTIKSFC KNARKLKVCR YRTVEDEFSN PSVTEIQKCL
401: ADEDYSGAMG FYVLLRAVDR FTANYNKFPG QFDGGMDEDI SRLKTTALSL LADLGCNGSV LPDDLINEMC RFGASELHVV AAFVGGIASQ EVIKLVTKQF
501: VPMLGTYIFN GIDHKSQLLT L
001: MQAVKRSRRH VEEEPTMVEP KTKYDRQLRI WGEVGQAALE EASICLLNCG PTGSEALKNL VLGGVGSITV VDGSKVQFGD LGNNFMVDAK SVGQSKAKSV
101: CAFLQELNDS VNAKFIEENP DTLITTNPSF FSQFTLVIAT QLVEDSMLKL DRICRDANVK LVLVRSYGLA GFVRISVKEH PIIDSKPDHF LDDLRLNNPW
201: PELKSFVETI DLNVSEPAAA HKHIPYVVIL VKMAEEWAQS HSGNLPSTRE EKKEFKDLVK SKMVSTDEDN YKEAIEAAFK VFAPRGISSE VQKLINDSCA
301: EVNSNSSAFW VMVAALKEFV LNEGGGEAPL EGSIPDMTSS TEHYINLQKI YLAKAEADFL VIEERVKNIL KKIGRDPSSI PKPTIKSFCK NARKLKLCRY
401: RMVEDEFRNP SVTEIQKYLA DEDYSGAMGF YILLRAADRF AANYNKFPGQ FDGGMDEDIS RLKTTALSLL TDLGCNGSVL PDDLIHEMCR FGASEIHVVS
501: AFVGGIASQE VIKLVTKQFV PMLGTYIFNG IDHKSQLLKL
101: CAFLQELNDS VNAKFIEENP DTLITTNPSF FSQFTLVIAT QLVEDSMLKL DRICRDANVK LVLVRSYGLA GFVRISVKEH PIIDSKPDHF LDDLRLNNPW
201: PELKSFVETI DLNVSEPAAA HKHIPYVVIL VKMAEEWAQS HSGNLPSTRE EKKEFKDLVK SKMVSTDEDN YKEAIEAAFK VFAPRGISSE VQKLINDSCA
301: EVNSNSSAFW VMVAALKEFV LNEGGGEAPL EGSIPDMTSS TEHYINLQKI YLAKAEADFL VIEERVKNIL KKIGRDPSSI PKPTIKSFCK NARKLKLCRY
401: RMVEDEFRNP SVTEIQKYLA DEDYSGAMGF YILLRAADRF AANYNKFPGQ FDGGMDEDIS RLKTTALSLL TDLGCNGSVL PDDLIHEMCR FGASEIHVVS
501: AFVGGIASQE VIKLVTKQFV PMLGTYIFNG IDHKSQLLKL
Arabidopsis Description
AXR1NEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WFT2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.