CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48184	Canola	cytosol	35.61	62.26
CDY67953	Canola	cytosol	37.05	49.52
CDY68016	Canola	cytosol	38.85	49.09
CDY08954	Canola	cytosol, mitochondrion	30.22	48.0
HORVU2Hr1G027820.1	Barley	cytosol	13.67	42.22
CDX92842	Canola	cytosol	39.93	34.47
CDX93356	Canola	cytosol	39.93	34.47
CDY03404	Canola	cytosol	39.57	34.16
CDY34327	Canola	cytosol	39.21	33.85
GSMUA_AchrUn_...	Banana	cytosol	29.86	25.7
TraesCS7D01G370300.1	Wheat	cytosol	28.78	24.1
TraesCS3B01G105300.2	Wheat	cytosol	28.42	23.8
TraesCS3A01G090000.1	Wheat	cytosol	28.42	23.8
TraesCS7A01G352700.2	Wheat	cytosol	28.06	23.71
TraesCS7B01G275300.1	Wheat	cytosol	28.06	23.57
TraesCS3D01G090000.1	Wheat	cytosol	28.06	23.49
Os11t0497000-01	Rice	cytosol	27.7	23.48
EES08513	Sorghum	cytosol	26.26	21.79
Zm00001d049163_P001	Maize	cytosol, extracellular	25.9	21.62
HORVU7Hr1G089410.1	Barley	cytosol, mitochondrion, nucleus	27.7	20.1
CDX81957	Canola	cytosol	6.47	15.93
HORVU3Hr1G016010.1	Barley	cytosol, plastid	26.62	15.88
CDY31150	Canola	cytosol	5.76	15.38
CDX98913	Canola	cytosol	5.76	15.38
HORVU3Hr1G016090.4	Barley	peroxisome	11.51	12.65
CDY10045	Canola	cytosol	18.35	10.62
CDX97381	Canola	extracellular	7.91	10.28
CDY15536	Canola	cytosol	19.06	10.17
CDY06162	Canola	cytosol	18.7	10.08
CDY55450	Canola	cytosol	18.7	9.98
CDY46837	Canola	nucleus	18.35	9.75
CDY49510	Canola	cytosol	17.99	9.56
CDY08955	Canola	cytosol	3.6	9.43
CDY48269	Canola	cytosol	17.63	9.33
CDY12209	Canola	cytosol	17.27	8.99
CDY08961	Canola	plastid	4.32	8.51
CDY49508	Canola	cytosol	8.99	7.81

Protein Annotations

EnsemblPlants:CDY31910	EnsemblPlantsGene:GSBRNA2T00050664001	Gene3D:3.40.50.720	GO:A0A078GZM9	GO:GO:0003674	GO:GO:0003824
GO:GO:0008641	InterPro:Ubiquitin-activating_enz	PANTHER:PTHR10953	PANTHER:PTHR10953:SF162	ProteinID:CDY31910	ProteinID:CDY31910.1
SUPFAM:SSF69572	UniParc:UPI0004EE33F5	UniProt:A0A078GZM9	MapMan:35.1	:	:

Description

BnaC09g28340DBnaC09g28340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZM9]

Coordinates

chrLK032282:+:109909..111789

Molecular Weight (calculated)

31241.5 Da

IEP (calculated)

5.134

GRAVY (calculated)

-0.181

Length

278 amino acids

Sequence
(BLAST)

001: MESNGKLHRK VTSCESLGTE STVNEIKATD PQDTFILIQI DLTTSVSEII SHIQISCERY LLEKEITLTV WCQDEEKHRN IRICDMLFIA TSHCLADFIF
101: SLGNHCLQLS DRERIDVKLN FTSDLRIGSI EEIDTFKDSL IEVFEESEGR KHGECSLLDL ATVLEIKKKL CEANSVSERH IPDSLLKRLI SGTIEFPPAC
201: AIVGGILAQE VIKAVSGKGD PVKNFFYYDA QDGKATSLCK ILLNFSRRFQ SEAEGKPVEI KEANCLVLKG DRFARHGE

Best Arabidopsis Sequence Match ( AT4G24940.1 )
(BLAST)

001: MDGEELTEQE TALYDRQIRV WGANAQRRLT KAHILVSGIK GTVAEFCKNI VLAGVGSVTL MDDRLANMEA LNANFLIPPD ENVYSGKTVA EICSDSLKDF
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS

Arabidopsis Description

SAE1ASUMO-activating enzyme subunit 1A [Source:UniProtKB/Swiss-Prot;Acc:Q8VY78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.