Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34327 | Canola | cytosol | 99.07 | 99.07 |
| CDX92842 | Canola | cytosol | 97.2 | 97.2 |
| CDX93356 | Canola | cytosol | 97.2 | 97.2 |
| AT4G24940.1 | Thale cress | cytosol | 88.51 | 88.51 |
| CDY08954 | Canola | cytosol, mitochondrion | 46.27 | 85.14 |
| CDY08955 | Canola | cytosol | 26.71 | 81.13 |
| VIT_17s0000g01270.t01 | Wine grape | cytosol | 70.5 | 70.28 |
| PGSC0003DMT400039493 | Potato | cytosol | 68.94 | 68.73 |
| KRH41120 | Soybean | nucleus | 59.94 | 68.68 |
| PGSC0003DMT400069346 | Potato | cytosol | 67.08 | 67.5 |
| KRH59806 | Soybean | cytosol, nucleus | 68.94 | 67.07 |
| Solyc06g072080.2.1 | Tomato | cytosol | 63.98 | 64.78 |
| Solyc03g019730.2.1 | Tomato | mitochondrion | 68.32 | 63.58 |
| GSMUA_AchrUn_... | Banana | cytosol | 63.35 | 63.16 |
| CDY08961 | Canola | plastid | 27.64 | 63.12 |
| CDY48184 | Canola | cytosol | 30.43 | 61.64 |
| Os11t0497000-01 | Rice | cytosol | 59.01 | 57.93 |
| TraesCS7A01G352700.2 | Wheat | cytosol | 58.7 | 57.45 |
| TraesCS7D01G370300.1 | Wheat | cytosol | 58.7 | 56.93 |
| EES08513 | Sorghum | cytosol | 59.01 | 56.72 |
| Zm00001d049163_P001 | Maize | cytosol, extracellular | 58.39 | 56.46 |
| CDY67953 | Canola | cytosol | 36.02 | 55.77 |
| TraesCS3B01G105300.2 | Wheat | cytosol | 56.83 | 55.12 |
| TraesCS3A01G090000.1 | Wheat | cytosol | 56.83 | 55.12 |
| TraesCS3D01G090000.1 | Wheat | cytosol | 56.52 | 54.82 |
| TraesCS7B01G275300.1 | Wheat | cytosol | 53.73 | 52.27 |
| HORVU7Hr1G089410.1 | Barley | cytosol, mitochondrion, nucleus | 59.01 | 49.61 |
| HORVU2Hr1G027820.1 | Barley | cytosol | 12.11 | 43.33 |
| CDY31910 | Canola | nucleus | 34.16 | 39.57 |
| HORVU3Hr1G016090.4 | Barley | peroxisome | 31.06 | 39.53 |
| HORVU3Hr1G016010.1 | Barley | cytosol, plastid | 56.83 | 39.27 |
| CDY68016 | Canola | cytosol | 25.16 | 36.82 |
| CDY31150 | Canola | cytosol | 5.9 | 18.27 |
| CDX98913 | Canola | cytosol | 5.9 | 18.27 |
| CDX81957 | Canola | cytosol | 5.9 | 16.81 |
| CDY10045 | Canola | cytosol | 22.67 | 15.21 |
| CDY55450 | Canola | cytosol | 24.53 | 15.16 |
| CDY15536 | Canola | cytosol | 24.22 | 14.97 |
| CDY06162 | Canola | cytosol | 23.6 | 14.73 |
| CDY49510 | Canola | cytosol | 23.6 | 14.53 |
| CDY46837 | Canola | nucleus | 23.29 | 14.34 |
| CDY48269 | Canola | cytosol | 22.98 | 14.1 |
| CDX97381 | Canola | extracellular | 9.01 | 13.55 |
| CDY12209 | Canola | cytosol | 22.36 | 13.48 |
| CDY49508 | Canola | cytosol | 12.42 | 12.5 |
Protein Annotations
| EnsemblPlants:CDY03404 | EnsemblPlantsGene:GSBRNA2T00116049001 | Gene3D:3.40.50.720 | GO:A0A078ERU1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008641 | InterPro:ThiF_NAD_FAD-bd | InterPro:Ubiquitin-activating_enz | PANTHER:PTHR10953 | PANTHER:PTHR10953:SF162 | PFAM:PF00899 |
| ProteinID:CDY03404 | ProteinID:CDY03404.1 | SEG:seg | SUPFAM:SSF69572 | UniParc:UPI0004EF2FCB | MapMan:19.2.2.2.2.1 |
Description
BnaC01g16780D
Coordinates
chrLK031943:-:268481..271120
Molecular Weight (calculated)
35927.1 Da
IEP (calculated)
4.978
GRAVY (calculated)
-0.198
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGEELTEQE TALYDRQIRV WGANAQRRLT KSHILVSGIK GTVAEFCKNI VLAGVGSVTL MDDSLVNEEA LNANFLIPPD ENAYRGKTVA EICCDSLKDF
101: NPMVLVSVEK GDLSARSTEF FEKFDVVVIG YGSLATKKAV NEKCRKLSKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EKVECELNFP SFQEAVSVPW
201: KPIPRRTAKL YFAMRVIEVF EENEGRKHGE CSLLDLPTVL EIKKKLCEAN TVSESHVPDS LLERLITGTI EFPPACAIVG GILAQEVIKA VSGKGEPLKN
301: FFYYDAQDGK GVMENISNSF TS
101: NPMVLVSVEK GDLSARSTEF FEKFDVVVIG YGSLATKKAV NEKCRKLSKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EKVECELNFP SFQEAVSVPW
201: KPIPRRTAKL YFAMRVIEVF EENEGRKHGE CSLLDLPTVL EIKKKLCEAN TVSESHVPDS LLERLITGTI EFPPACAIVG GILAQEVIKA VSGKGEPLKN
301: FFYYDAQDGK GVMENISNSF TS
001: MDGEELTEQE TALYDRQIRV WGANAQRRLT KAHILVSGIK GTVAEFCKNI VLAGVGSVTL MDDRLANMEA LNANFLIPPD ENVYSGKTVA EICSDSLKDF
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS
Arabidopsis Description
SAE1ASUMO-activating enzyme subunit 1A [Source:UniProtKB/Swiss-Prot;Acc:Q8VY78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.