Factsheet for HORVU3Hr1G016090.4

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G077710.3
HORVU7Hr1G036470.3
HORVU7Hr1G036500.7
HORVU7Hr1G036540.3
HORVU7Hr1G036570.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G50680.1	HORVU6Hr1G077710.3	AT4G25200.1	21798944
AT5G50680.1	HORVU7Hr1G036470.3	AT4G25200.1	21798944
AT5G50680.1	HORVU7Hr1G036500.7	AT4G25200.1	21798944
AT5G50680.1	HORVU7Hr1G036540.3	AT4G25200.1	21798944
AT5G50680.1	HORVU7Hr1G036570.2	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G105300.2	Wheat	cytosol	60.08	45.78
TraesCS3D01G090000.1	Wheat	cytosol	59.68	45.48
TraesCS3A01G090000.1	Wheat	cytosol	59.68	45.48
CDY08955	Canola	cytosol	18.18	43.4
Os11t0497000-01	Rice	cytosol	53.36	41.16
EES08513	Sorghum	cytosol	52.96	40.0
Zm00001d049163_P001	Maize	cytosol, extracellular	51.38	39.04
HORVU7Hr1G089410.1	Barley	cytosol, mitochondrion, nucleus	58.89	38.9
KRH41120	Soybean	nucleus	39.53	35.59
HORVU3Hr1G016010.1	Barley	cytosol, plastid	64.03	34.76
GSMUA_AchrUn_...	Banana	cytosol	43.08	33.75
VIT_17s0000g01270.t01	Wine grape	cytosol	41.5	32.51
PGSC0003DMT400039493	Potato	cytosol	41.5	32.51
PGSC0003DMT400069346	Potato	cytosol	40.71	32.19
HORVU3Hr1G105710.1	Barley	cytosol, nucleus	9.09	31.94
Solyc06g072080.2.1	Tomato	cytosol	39.92	31.76
CDY34327	Canola	cytosol	39.53	31.06
Bra013848.1-P	Field mustard	cytosol	39.53	31.06
CDY03404	Canola	cytosol	39.53	31.06
CDX93356	Canola	cytosol	39.13	30.75
CDX92842	Canola	cytosol	39.13	30.75
KRH59806	Soybean	cytosol, nucleus	39.92	30.51
Solyc03g019730.2.1	Tomato	mitochondrion	41.11	30.06
AT4G24940.1	Thale cress	cytosol	37.94	29.81
AT5G50580.2	Thale cress	cytosol	37.15	29.38
AT5G50680.1	Thale cress	cytosol	37.15	29.38
CDY08961	Canola	plastid	14.23	25.53
CDY08954	Canola	cytosol, mitochondrion	14.23	20.57
Bra003552.1-P	Field mustard	cytosol	9.09	14.84
CDY48184	Canola	cytosol	9.09	14.47
CDY68016	Canola	cytosol	10.67	12.27
CDY67953	Canola	cytosol	9.88	12.02
Bra023205.1-P	Field mustard	cytosol	9.88	11.63
CDY31910	Canola	nucleus	12.65	11.51
HORVU2Hr1G027820.1	Barley	cytosol	3.16	8.89
HORVU5Hr1G081370.10	Barley	cytosol, nucleus, plastid	20.55	8.83

Protein Annotations

EnsemblPlants:HORVU3Hr1G016090.4	EnsemblPlantsGene:HORVU3Hr1G016090	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008641	GO:GO:0016020	GO:GO:0016021	InterPro:ThiF_NAD_FAD-bd	InterPro:Ubiquitin-activating_enz	PANTHER:PTHR10953
PANTHER:PTHR10953:SF162	PFAM:PF00899	SEG:seg	SUPFAM:SSF69572	TMHMM:TMhelix	UniParc:UPI000B48581D
UniProt:A0A287K8F0	MapMan:19.2.2.2.2.1	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:38449419..38452027

Molecular Weight (calculated)

24839.4 Da

IEP (calculated)

5.863

GRAVY (calculated)

0.315

Length

253 amino acids

Sequence
(BLAST)

001: GXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXHLMFH LVNAHYFLTE FCKNIVLAGV GSLSLMDDHI VTEDDLSANF LIPHDESMHG GCSRAEACCE
101: SLKDFNPMVR VAVAKGDPSV IDEGFIDSFD IIVVSCTSLK TKLFINDNCR KRSKRIAFYS VECKDSCGEI FVDLQNHSYL QKKPGGEPEQ QELTYASLQV
201: CKFDLFFVVV WSLFFLCFLK LFVLCKYLCV IASVILLSLC LPPLKYWFNL LLY

Best Arabidopsis Sequence Match ( AT4G24940.1 )
(BLAST)

001: MDGEELTEQE TALYDRQIRV WGANAQRRLT KAHILVSGIK GTVAEFCKNI VLAGVGSVTL MDDRLANMEA LNANFLIPPD ENVYSGKTVA EICSDSLKDF
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS

Arabidopsis Description

SAE1ASUMO-activating enzyme subunit 1A [Source:UniProtKB/Swiss-Prot;Acc:Q8VY78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.