Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d049163_P001 | Maize | cytosol, extracellular | 92.84 | 93.39 |
| TraesCS7D01G370300.1 | Wheat | cytosol | 82.99 | 83.73 |
| TraesCS7A01G352700.2 | Wheat | cytosol | 81.49 | 82.98 |
| Os11t0497000-01 | Rice | cytosol | 80.9 | 82.62 |
| TraesCS3B01G105300.2 | Wheat | cytosol | 80.6 | 81.33 |
| TraesCS3A01G090000.1 | Wheat | cytosol | 80.3 | 81.02 |
| TraesCS3D01G090000.1 | Wheat | cytosol | 80.0 | 80.72 |
| TraesCS7B01G275300.1 | Wheat | cytosol | 77.61 | 78.55 |
| HORVU7Hr1G089410.1 | Barley | cytosol, mitochondrion, nucleus | 81.49 | 71.28 |
| HORVU2Hr1G027820.1 | Barley | cytosol | 19.1 | 71.11 |
| GSMUA_AchrUn_... | Banana | cytosol | 65.67 | 68.11 |
| VIT_17s0000g01270.t01 | Wine grape | cytosol | 60.6 | 62.85 |
| PGSC0003DMT400069346 | Potato | cytosol | 59.7 | 62.5 |
| Solyc06g072080.2.1 | Tomato | cytosol | 58.51 | 61.64 |
| PGSC0003DMT400039493 | Potato | cytosol | 59.1 | 61.3 |
| CDX92842 | Canola | cytosol | 58.51 | 60.87 |
| CDX93356 | Canola | cytosol | 58.51 | 60.87 |
| KRH59806 | Soybean | cytosol, nucleus | 59.7 | 60.42 |
| KRH41120 | Soybean | nucleus | 50.45 | 60.14 |
| AT5G50580.2 | Thale cress | cytosol | 57.31 | 60.0 |
| AT5G50680.1 | Thale cress | cytosol | 57.31 | 60.0 |
| Bra013848.1-P | Field mustard | cytosol | 57.31 | 59.63 |
| CDY34327 | Canola | cytosol | 57.31 | 59.63 |
| AT4G24940.1 | Thale cress | cytosol | 57.01 | 59.32 |
| CDY03404 | Canola | cytosol | 56.72 | 59.01 |
| HORVU3Hr1G016010.1 | Barley | cytosol, plastid | 80.9 | 58.15 |
| CDY08955 | Canola | cytosol | 18.21 | 57.55 |
| Solyc03g019730.2.1 | Tomato | mitochondrion | 59.1 | 57.23 |
| CDY08954 | Canola | cytosol, mitochondrion | 28.96 | 55.43 |
| HORVU3Hr1G016090.4 | Barley | peroxisome | 40.0 | 52.96 |
| CDY08961 | Canola | plastid | 16.72 | 39.72 |
| Bra003552.1-P | Field mustard | cytosol | 17.91 | 38.71 |
| CDY48184 | Canola | cytosol | 17.91 | 37.74 |
| CDY67953 | Canola | cytosol | 21.49 | 34.62 |
| Bra023205.1-P | Field mustard | cytosol | 21.49 | 33.49 |
| CDY68016 | Canola | cytosol | 17.91 | 27.27 |
| CDY31910 | Canola | nucleus | 21.79 | 26.26 |
| KXG37258 | Sorghum | cytosol | 25.07 | 15.88 |
Protein Annotations
| MapMan:19.2.2.2.2.1 | Gene3D:3.40.50.720 | EntrezGene:8055007 | UniProt:C5Y2L6 | EnsemblPlants:EES08513 | ProteinID:EES08513 |
| ProteinID:EES08513.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008641 | GO:GO:0009987 |
| GO:GO:0016925 | GO:GO:0019538 | GO:GO:0019948 | PFAM:PF00899 | PRINTS:PR01849 | PANTHER:PTHR10953 |
| PANTHER:PTHR10953:SF162 | EnsemblPlantsGene:SORBI_3005G120700 | SUPFAM:SSF69572 | unigene:Sbi.11753 | InterPro:ThiF_NAD_FAD-bd | InterPro:UBQ/SUMO-activ_enz_E1-like |
| UniParc:UPI0001A86369 | InterPro:Ubiquitin-activating_enz | RefSeq:XP_002449525.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr5:+:52910294..52918144
Molecular Weight (calculated)
36681.9 Da
IEP (calculated)
5.151
GRAVY (calculated)
-0.230
Length
335 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGGAGAGV GGSEGELTAQ ETALYDRQIR VWGVDAQKRL SKSHVLVCGM NGTTIEFCKN IVLAGVGSLS LMDDHVVTED DLNANFLIPP DESIYGGRSR
101: AEVCCESLVD FNPMVRVSVE KGDPSLIDGE FLDKFDIVVL SRASLKTKLF INENCRKRSK HIAFYTIDCK DSCGEIFVDL QKHSYVQKKP GGSTEQQELT
201: YPSLQEAISV PWSNLPKKTS KLYFAMRVLE DYELSEGRSP GETTLSDIHA VLARRKDMCD KMSLNESRIP TTLVERLLAA GKKEHPPVCA ILGGILGQEV
301: IKSISCKGDP VKNFFYFDVA DGKGVIEDIP PPPAN
101: AEVCCESLVD FNPMVRVSVE KGDPSLIDGE FLDKFDIVVL SRASLKTKLF INENCRKRSK HIAFYTIDCK DSCGEIFVDL QKHSYVQKKP GGSTEQQELT
201: YPSLQEAISV PWSNLPKKTS KLYFAMRVLE DYELSEGRSP GETTLSDIHA VLARRKDMCD KMSLNESRIP TTLVERLLAA GKKEHPPVCA ILGGILGQEV
301: IKSISCKGDP VKNFFYFDVA DGKGVIEDIP PPPAN
001: MDGEELTEQE TALYDRQIRV WGANAQRRLT KAHILVSGIK GTVAEFCKNI VLAGVGSVTL MDDRLANMEA LNANFLIPPD ENVYSGKTVA EICSDSLKDF
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS
Arabidopsis Description
SAE1ASUMO-activating enzyme subunit 1A [Source:UniProtKB/Swiss-Prot;Acc:Q8VY78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.