Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G352700.2 | Wheat | cytosol | 93.98 | 94.83 |
| TraesCS7B01G275300.1 | Wheat | cytosol | 92.77 | 93.05 |
| TraesCS3D01G090000.1 | Wheat | cytosol | 87.35 | 87.35 |
| Os11t0497000-01 | Rice | cytosol | 83.13 | 84.15 |
| EES08513 | Sorghum | cytosol | 83.73 | 82.99 |
| Zm00001d049163_P001 | Maize | cytosol, extracellular | 83.13 | 82.88 |
| HORVU7Hr1G089410.1 | Barley | cytosol, mitochondrion, nucleus | 93.67 | 81.2 |
| GSMUA_AchrUn_... | Banana | cytosol | 62.95 | 64.71 |
| VIT_17s0000g01270.t01 | Wine grape | cytosol | 61.45 | 63.16 |
| PGSC0003DMT400039493 | Potato | cytosol | 60.24 | 61.92 |
| PGSC0003DMT400069346 | Potato | cytosol | 59.04 | 61.25 |
| Solyc06g072080.2.1 | Tomato | cytosol | 58.13 | 60.69 |
| CDX93356 | Canola | cytosol | 57.83 | 59.63 |
| CDX92842 | Canola | cytosol | 57.83 | 59.63 |
| KRH59806 | Soybean | cytosol, nucleus | 59.34 | 59.52 |
| KRH41120 | Soybean | nucleus | 50.3 | 59.43 |
| AT4G24940.1 | Thale cress | cytosol | 57.53 | 59.32 |
| CDY34327 | Canola | cytosol | 57.53 | 59.32 |
| Bra013848.1-P | Field mustard | cytosol | 57.53 | 59.32 |
| AT5G50580.2 | Thale cress | cytosol | 56.63 | 58.75 |
| AT5G50680.1 | Thale cress | cytosol | 56.63 | 58.75 |
| CDY03404 | Canola | cytosol | 56.93 | 58.7 |
| Solyc03g019730.2.1 | Tomato | mitochondrion | 60.24 | 57.8 |
| CDY08955 | Canola | cytosol | 18.37 | 57.55 |
| CDY08954 | Canola | cytosol, mitochondrion | 28.01 | 53.14 |
| Bra003552.1-P | Field mustard | cytosol | 19.58 | 41.94 |
| CDY48184 | Canola | cytosol | 19.58 | 40.88 |
| CDY08961 | Canola | plastid | 15.96 | 37.59 |
| CDY67953 | Canola | cytosol | 23.19 | 37.02 |
| Bra023205.1-P | Field mustard | cytosol | 23.19 | 35.81 |
| CDY31910 | Canola | nucleus | 24.1 | 28.78 |
| CDY68016 | Canola | cytosol | 18.37 | 27.73 |
| TraesCS5D01G490100.3 | Wheat | plastid | 24.4 | 14.97 |
| TraesCS5D01G324800.3 | Wheat | mitochondrion | 24.4 | 13.97 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G370300.1 | EnsemblPlantsGene:TraesCS7D01G370300 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008641 | GO:GO:0009987 | GO:GO:0019538 | InterPro:ThiF_NAD_FAD-bd |
| InterPro:UBQ/SUMO-activ_enz_E1-like | InterPro:Ubiquitin-activating_enz | PANTHER:PTHR10953 | PANTHER:PTHR10953:SF162 | PFAM:PF00899 | PRINTS:PR01849 |
| SEG:seg | SUPFAM:SSF69572 | MapMan:19.2.2.2.2.1 | : | : | : |
Description
No Description!
Coordinates
chr7D:-:478791421..478798674
Molecular Weight (calculated)
36493.5 Da
IEP (calculated)
4.882
GRAVY (calculated)
-0.338
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGGGGGAE EEELTAQETA LYDRQIRVWG VDAQKRLSKA HVLVCGVNGT TIEFCKNIVL AGVGSLSLMD DHIVTEDDLN SNFLIPHDES VYGGKSRAEV
101: CCESLKDFNP MVRVAVAKGD PSLIDGTFID RFDIIVLSRA SLKTKLFIND NCRKRSKHIA FYSVDCKDSC GEIFVDLQNH SYLQKKPGGE PEQQELKYPS
201: LQEAISVPWK DLSKKTTKLY YAMRVLESYE SSEGRDPGET SLSDLPAVLA LRKDMCDRMS LDESRIPTSL LERLLAAGKK EHPPVCAILG GILGQEVIKS
301: ISCKGDPIKN FFYYDAADGK GAMEDTPPTP ED
101: CCESLKDFNP MVRVAVAKGD PSLIDGTFID RFDIIVLSRA SLKTKLFIND NCRKRSKHIA FYSVDCKDSC GEIFVDLQNH SYLQKKPGGE PEQQELKYPS
201: LQEAISVPWK DLSKKTTKLY YAMRVLESYE SSEGRDPGET SLSDLPAVLA LRKDMCDRMS LDESRIPTSL LERLLAAGKK EHPPVCAILG GILGQEVIKS
301: ISCKGDPIKN FFYYDAADGK GAMEDTPPTP ED
001: MDGEELTEQE TALYDRQIRV WGANAQRRLT KAHILVSGIK GTVAEFCKNI VLAGVGSVTL MDDRLANMEA LNANFLIPPD ENVYSGKTVA EICSDSLKDF
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS
Arabidopsis Description
SAE1ASUMO-activating enzyme subunit 1A [Source:UniProtKB/Swiss-Prot;Acc:Q8VY78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.