Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48184 | Canola | cytosol | 46.29 | 50.94 |
| CDX92842 | Canola | cytosol | 90.29 | 49.07 |
| CDX93356 | Canola | cytosol | 90.29 | 49.07 |
| CDY08961 | Canola | plastid | 39.43 | 48.94 |
| Bra013848.1-P | Field mustard | cytosol | 86.29 | 46.89 |
| CDY34327 | Canola | cytosol | 85.71 | 46.58 |
| CDY03404 | Canola | cytosol | 85.14 | 46.27 |
| AT4G24940.1 | Thale cress | cytosol | 83.43 | 45.34 |
| CDY67953 | Canola | cytosol | 52.57 | 44.23 |
| KRH41120 | Soybean | nucleus | 62.29 | 38.79 |
| HORVU2Hr1G027820.1 | Barley | cytosol | 18.86 | 36.67 |
| PGSC0003DMT400039493 | Potato | cytosol | 62.86 | 34.06 |
| KRH59806 | Soybean | cytosol, nucleus | 62.29 | 32.93 |
| VIT_17s0000g01270.t01 | Wine grape | cytosol | 60.57 | 32.82 |
| Solyc03g019730.2.1 | Tomato | mitochondrion | 63.43 | 32.08 |
| PGSC0003DMT400069346 | Potato | cytosol | 58.29 | 31.88 |
| GSMUA_AchrUn_... | Banana | cytosol | 57.71 | 31.27 |
| Solyc06g072080.2.1 | Tomato | cytosol | 55.43 | 30.5 |
| CDY31910 | Canola | nucleus | 48.0 | 30.22 |
| Os11t0497000-01 | Rice | cytosol | 56.0 | 29.88 |
| Zm00001d049163_P001 | Maize | cytosol, extracellular | 55.43 | 29.13 |
| EES08513 | Sorghum | cytosol | 55.43 | 28.96 |
| TraesCS7A01G352700.2 | Wheat | cytosol | 53.71 | 28.57 |
| TraesCS3A01G090000.1 | Wheat | cytosol | 53.71 | 28.31 |
| TraesCS3D01G090000.1 | Wheat | cytosol | 53.71 | 28.31 |
| TraesCS3B01G105300.2 | Wheat | cytosol | 53.71 | 28.31 |
| TraesCS7D01G370300.1 | Wheat | cytosol | 53.14 | 28.01 |
| TraesCS7B01G275300.1 | Wheat | cytosol | 52.57 | 27.79 |
| CDY68016 | Canola | cytosol | 33.71 | 26.82 |
| HORVU7Hr1G089410.1 | Barley | cytosol, mitochondrion, nucleus | 53.14 | 24.28 |
| HORVU3Hr1G016010.1 | Barley | cytosol, plastid | 52.57 | 19.74 |
| HORVU3Hr1G016090.4 | Barley | peroxisome | 20.57 | 14.23 |
| CDY49508 | Canola | cytosol | 16.0 | 8.75 |
| CDY55450 | Canola | cytosol | 21.14 | 7.1 |
| CDY15536 | Canola | cytosol | 21.14 | 7.1 |
| CDY10045 | Canola | cytosol | 19.43 | 7.08 |
| CDY06162 | Canola | cytosol | 20.0 | 6.78 |
| CDX98913 | Canola | cytosol | 4.0 | 6.73 |
| CDY31150 | Canola | cytosol | 4.0 | 6.73 |
| CDY49510 | Canola | cytosol | 19.43 | 6.5 |
| CDY46837 | Canola | nucleus | 19.43 | 6.5 |
| CDX81957 | Canola | cytosol | 4.0 | 6.19 |
| CDY48269 | Canola | cytosol | 17.71 | 5.9 |
| CDY12209 | Canola | cytosol | 16.57 | 5.43 |
| CDX97381 | Canola | extracellular | 4.57 | 3.74 |
| CDY08955 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY08954 | EnsemblPlantsGene:GSBRNA2T00000999001 | Gene3D:3.40.50.720 | GO:A0A078F7D5 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008641 | InterPro:Ubiquitin-activating_enz | PANTHER:PTHR10953 | PANTHER:PTHR10953:SF162 | ProteinID:CDY08954 | ProteinID:CDY08954.1 |
| SUPFAM:SSF69572 | UniParc:UPI0004EDC2B7 | UniProt:A0A078F7D5 | MapMan:19.2.2.2.2.1 | : | : |
Description
BnaC08g11840DBnaC08g11840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7D5]
Coordinates
chrLK031990:-:796730..797919
Molecular Weight (calculated)
19988.1 Da
IEP (calculated)
5.107
GRAVY (calculated)
-0.189
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLMSVNEQC RKLSKRVAFY TIDCRDSCGE IFFDLQDYKY TKKQLKETVE CEQHFPSFQE AISVPWKLIP RRTAKLYFAM RVIEVFEENE GLLETKKKLC
101: EANSVSESHI PDTLLERLIS GTIEFPPACA IVGGILAQEV IKAVSGKGDP VKNFFYYDAQ DGKGVMEDIF NSFTC
101: EANSVSESHI PDTLLERLIS GTIEFPPACA IVGGILAQEV IKAVSGKGDP VKNFFYYDAQ DGKGVMEDIF NSFTC
001: MDGEELTEQE TALYDRQIRV WGANAQRRLT KAHILVSGIK GTVAEFCKNI VLAGVGSVTL MDDRLANMEA LNANFLIPPD ENVYSGKTVA EICSDSLKDF
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS
Arabidopsis Description
SAE1ASUMO-activating enzyme subunit 1A [Source:UniProtKB/Swiss-Prot;Acc:Q8VY78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.