CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48269	Canola	cytosol	95.13	96.76
CDY46837	Canola	nucleus	81.09	82.79
AT2G32410.1	Thale cress	nucleus	80.9	82.6
CDY49510	Canola	cytosol	80.52	82.22
CDY55450	Canola	cytosol	79.59	81.57
CDY06162	Canola	cytosol	78.46	81.2
CDY15536	Canola	cytosol	78.84	80.81
CDY10045	Canola	cytosol	69.29	77.08
CDX98913	Canola	cytosol	14.04	72.12
CDY31150	Canola	cytosol	14.04	72.12
GSMUA_Achr5P02360_001	Banana	cytosol	68.16	68.94
CDX81957	Canola	cytosol	14.04	66.37
Os03t0820100-01	Rice	cytosol	65.36	65.72
HORVU3Hr1G105710.1	Barley	cytosol, nucleus	8.8	65.28
TraesCS5B01G489700.1	Wheat	cytosol	63.3	64.88
KXG37258	Sorghum	cytosol	64.23	64.84
Zm00001d034640_P003	Maize	cytosol, extracellular	63.86	64.46
TraesCS5A01G476800.1	Wheat	cytosol	63.86	64.34
TraesCS5A01G318500.3	Wheat	cytosol	63.67	64.15
Zm00001d012969_P008	Maize	cytosol	63.48	63.96
CDY49508	Canola	cytosol	38.2	63.75
TraesCS5D01G490100.3	Wheat	plastid	63.3	62.48
TraesCS5B01G319000.2	Wheat	golgi	63.67	59.44
TraesCS5D01G324800.3	Wheat	mitochondrion	63.67	58.62
HORVU5Hr1G081370.10	Barley	cytosol, nucleus, plastid	64.04	58.06
CDX97381	Canola	extracellular	21.16	52.8
CDY08955	Canola	cytosol	4.68	23.58
CDX92842	Canola	cytosol	13.48	22.36
CDX93356	Canola	cytosol	13.48	22.36
CDY03404	Canola	cytosol	13.48	22.36
CDY34327	Canola	cytosol	13.48	22.36
CDY48184	Canola	cytosol	5.81	19.5
CDY68016	Canola	cytosol	7.12	17.27
CDY31910	Canola	nucleus	8.99	17.27
CDY08954	Canola	cytosol, mitochondrion	5.43	16.57
CDY67953	Canola	cytosol	5.99	15.38
CDY08961	Canola	plastid	2.81	10.64

Protein Annotations

MapMan:19.2.2.3.3.2	Gene3D:3.40.50.720	GO:A0A078FGS3	UniProt:A0A078FGS3	InterPro:APP-BP1	EnsemblPlants:CDY12209
ProteinID:CDY12209	ProteinID:CDY12209.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0008641	GO:GO:0009987	GO:GO:0019538	GO:GO:0019781	GO:GO:0045116
EnsemblPlantsGene:GSBRNA2T00061228001	PFAM:PF00899	PIRSF:PIRSF039099	PANTHER:PTHR10953	PANTHER:PTHR10953:SF29	SUPFAM:SSF69572
InterPro:ThiF_NAD_FAD-bd	UniPathway:UPA00885	UniParc:UPI0004EDECF4	InterPro:Ubiquitin-activating_enz	:	:

Description

BnaC04g12390DNEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A078FGS3]

Coordinates

chrLK032018:-:440065..446402

Molecular Weight (calculated)

59714.3 Da

IEP (calculated)

4.823

GRAVY (calculated)

-0.250

Length

534 amino acids

Sequence
(BLAST)

001: MEKDEQEPTM SEPTKTKYDR QLRIWGEVGQ AALENASICL LNCGPTGSEA LKNLVLGGIG SITVVDGSRV EIGDLGNNFM VDKKSVGESK AKTVCAFLQE
101: LNDAVRAHFV EENPDSLILT DPSFFSQFTL VIATQLVEDS MVKLDRICRE ANVMLVFARS YGLTGLVRIS VKEHTIIDSK PDHFLDDLRL NNPWPELKRF
201: VETIDLKTPD PIAHKHIPYV VILVKMADEW AKTHSSNLPS TREEKREFKD LVKSKMVSMD EDNYKEAVEA TFKVFAPRGI SKEIQEIIDD RYAEVGSNSS
301: AFWVMVAALK EFVSNEGDGE APLEGSMPDM TSSTEHYINL QKIYHTKAED DCLSMEQRVK DILAKVGRDP SSISKQTIKS FCKNARKLKV CRYRMIEDEF
401: SNPSVTELQK CLASQDYSSA IGFYILLRAV DRFAATYNKF PGQFDGGDIE EDASRLRTIA PSVINEMGCD GYELPEELCN EMCRFGAAEL HVVAAFIGGI
501: ASQEVIKLIT KQFVPMLGTF VFNGIDHNSQ SLTL

Best Arabidopsis Sequence Match ( AT2G32410.1 )
(BLAST)

001: MAEPKTKYDR QLRIWGELGQ SALETASICL LNCGPTGSEA LKNLVIGGIG SITIVDGSKV EIGDLGNNFM VDAKSVGQSR AKTVCGFLQE LNDSVKANFV
101: EENPDTLIST DPSFFSQFTL VIATQLVEDS MVKLDRICRE ANVMLVLARS YGLTGFVRIS VKEHTAIETK PDHSLDDLRL NSPWPELKSY VESIDLNVEE
201: PAAHKHIPYV VILVKVAEEW AQHHSGNLPS TREEKNEFKD LVKSKMVSAD EENYKEALLA AFKVFAPTGI SQEIQDINHD SCAEVGSNSS DFWVMVAALK
301: EFISNEGGGE VPLEGSMPDM ISSTEHYINL QKIYHSKAEA DFLSMEQRVK SILVKVGQDP SSISKPTIKS FCKNARKLKV CRYRTIEDEF KSPSTTELHK
401: YLADENYSGA IGFYILLRAV DRFAGTYKKF PGQFDGSTDE DASQLKTIAL SLLSEMGCDG YELQEELYNE MCRFGAAEIH VVAALIGGIT SQEVIKLITK
501: QFVPKRGTFI FNGIDHKSQS LTL

Arabidopsis Description

AXL1NEDD8-activating enzyme E1 regulatory subunit AXL [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV69]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.