Factsheet for Os03t0820100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os08t0374100-01
Os09t0321900-01
Os10t0190000-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05180.1	Os08t0374100-01	AT4G36800.1	12682009
AT1G05180.1	Os09t0321900-01	AT4G36800.1	12682009
AT1G05180.1	Os10t0190000-02	AT4G36800.1	12682009

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37258	Sorghum	cytosol	87.19	87.52
TraesCS5A01G318500.3	Wheat	cytosol	87.19	87.36
Zm00001d034640_P003	Maize	cytosol, extracellular	86.63	86.96
TraesCS5B01G489700.1	Wheat	cytosol	84.93	86.56
TraesCS5A01G476800.1	Wheat	cytosol	86.25	86.42
HORVU3Hr1G105710.1	Barley	cytosol, nucleus	11.68	86.11
Zm00001d012969_P008	Maize	cytosol	85.69	85.85
TraesCS5D01G490100.3	Wheat	plastid	85.31	83.73
TraesCS5B01G319000.2	Wheat	golgi	87.76	81.47
TraesCS5D01G324800.3	Wheat	mitochondrion	87.38	80.0
HORVU5Hr1G081370.10	Barley	cytosol, nucleus, plastid	87.01	78.44
GSMUA_Achr5P02360_001	Banana	cytosol	71.75	72.16
VIT_12s0059g00610.t01	Wine grape	cytosol	69.68	70.75
KRH56132	Soybean	cytosol	68.36	69.41
KRH25373	Soybean	cytosol	67.61	68.64
CDY46837	Canola	nucleus	66.67	67.69
Bra015396.1-P	Field mustard	nucleus	63.47	67.54
PGSC0003DMT400070486	Potato	cytosol	68.17	67.41
CDY55450	Canola	cytosol	66.1	67.37
CDY06162	Canola	cytosol	64.97	66.86
Solyc12g005870.1.1	Tomato	cytosol	62.9	66.8
Bra032482.1-P	Field mustard	cytosol	60.08	66.74
CDY49510	Canola	cytosol	65.54	66.54
Solyc11g072460.1.1	Tomato	cytosol	67.23	66.48
CDY15536	Canola	cytosol	65.16	66.41
CDY48269	Canola	cytosol	65.35	66.1
AT2G32410.1	Thale cress	nucleus	64.97	65.97
Bra005592.1-P	Field mustard	cytosol	65.16	65.9
AT1G05180.1	Thale cress	cytosol	66.86	65.74
CDY12209	Canola	cytosol	65.72	65.36
CDY10045	Canola	cytosol	57.82	63.96
CDY31150	Canola	cytosol	12.05	61.54
CDX98913	Canola	cytosol	12.05	61.54
Bra020995.1-P	Field mustard	cytosol	12.99	57.98
AT3G25880.2	Thale cress	cytosol	7.91	56.76
CDX81957	Canola	cytosol	11.86	55.75
CDY49508	Canola	cytosol	32.58	54.06
CDX97381	Canola	extracellular	18.08	44.86
Os11t0497000-01	Rice	cytosol	15.25	24.7

Protein Annotations

MapMan:19.2.2.3.3.2	Gene3D:3.40.50.720	EntrezGene:4334591	ProteinID:AAO65878.1	ProteinID:ABF99582.1	EMBL:AK111534
InterPro:APP-BP1	ProteinID:BAF13631.1	ProteinID:BAS87080.1	ProteinID:EEE60189.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0008641	GO:GO:0009987	GO:GO:0019538	GO:GO:0019781	GO:GO:0045116
EnsemblPlantsGene:Os03g0820100	EnsemblPlants:Os03t0820100-01	PFAM:PF00899	PIRSF:PIRSF039099	PANTHER:PTHR10953	PANTHER:PTHR10953:SF29
UniProt:Q84T99	SUPFAM:SSF69572	InterPro:ThiF_NAD_FAD-bd	UniParc:UPI00000560E7	InterPro:Ubiquitin-activating_enz	RefSeq:XP_015627762.1
SEG:seg	:	:	:	:	:

Description

Similar to Auxin-resistance protein AXR1. (Os03t0820100-01)

Coordinates

chr3:+:34412840..34419139

Molecular Weight (calculated)

59135.7 Da

IEP (calculated)

4.836

GRAVY (calculated)

-0.122

Length

531 amino acids

Sequence
(BLAST)

001: MAAATAAAFA EPKTKYDRQL RIWGDQGQAA LEKASICLLT CGPTGTEAMK NLVLGGVGSV TVVDGSKVEQ SDMGNNFLLD AECLGQSRAK SVCSFLQELN
101: DAVNAKFVEE SPLALIDTNP SFFSQFTVVI ATQLPERSLL KLDDICRKAN IVLVAARSYG LTGLVRISVK EHNVIESKPD HFLDDLRLHN PWVELKQFAK
201: SIDINDKDPV VHKHTPYIVI LVRLAEKWAD AHDGRLPSTR QEKNEFKALI REYMLNLDEE NYKEAVESSY KVSVTPGISD EIRQIIDDSS AEVNSSSSDF
301: WVLVAALKEF IANEGNGELP LEGTIPDMTS LTEYYVSLQK IYQAKAESDC LALEHHVKDI LKRIDRDPDS ISRAYIKTFC KNARKLRVCR YRSMEEEFSS
401: PVLSEVQIYF TDEDYCFAMN FYVLLRAVDR LAANYNRCPG IFESEIDEDV PRLKTAAVSV MSEMGMNGAP LSEDLITEMC RFGGAEIHPV AAFIGGVASQ
501: EVIKLVTKQF VPLLGTFIFN GIDHKSQVLA L

Best Arabidopsis Sequence Match ( AT1G05180.1 )
(BLAST)

001: MQAVKRSRRH VEEEPTMVEP KTKYDRQLRI WGEVGQAALE EASICLLNCG PTGSEALKNL VLGGVGSITV VDGSKVQFGD LGNNFMVDAK SVGQSKAKSV
101: CAFLQELNDS VNAKFIEENP DTLITTNPSF FSQFTLVIAT QLVEDSMLKL DRICRDANVK LVLVRSYGLA GFVRISVKEH PIIDSKPDHF LDDLRLNNPW
201: PELKSFVETI DLNVSEPAAA HKHIPYVVIL VKMAEEWAQS HSGNLPSTRE EKKEFKDLVK SKMVSTDEDN YKEAIEAAFK VFAPRGISSE VQKLINDSCA
301: EVNSNSSAFW VMVAALKEFV LNEGGGEAPL EGSIPDMTSS TEHYINLQKI YLAKAEADFL VIEERVKNIL KKIGRDPSSI PKPTIKSFCK NARKLKLCRY
401: RMVEDEFRNP SVTEIQKYLA DEDYSGAMGF YILLRAADRF AANYNKFPGQ FDGGMDEDIS RLKTTALSLL TDLGCNGSVL PDDLIHEMCR FGASEIHVVS
501: AFVGGIASQE VIKLVTKQFV PMLGTYIFNG IDHKSQLLKL

Arabidopsis Description

AXR1NEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WFT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.