Factsheet for Solyc11g072460.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400070486	Potato	cytosol	97.21	97.21
Solyc12g005870.1.1	Tomato	cytosol	82.68	88.8
VIT_12s0059g00610.t01	Wine grape	cytosol	80.45	82.6
KRH56132	Soybean	cytosol	75.42	77.44
KRH25373	Soybean	cytosol	74.67	76.67
Bra015396.1-P	Field mustard	nucleus	69.09	74.35
Bra032482.1-P	Field mustard	cytosol	64.62	72.59
Bra005592.1-P	Field mustard	cytosol	70.2	71.81
GSMUA_Achr5P02360_001	Banana	cytosol	68.72	69.89
Os03t0820100-01	Rice	cytosol	66.48	67.23
Bra020995.1-P	Field mustard	cytosol	14.9	67.23
HORVU3Hr1G105710.1	Barley	cytosol, nucleus	8.94	66.67
KXG37258	Sorghum	cytosol	65.55	66.54
TraesCS5B01G489700.1	Wheat	cytosol	64.06	66.03
Zm00001d034640_P003	Maize	cytosol, extracellular	64.99	65.97
TraesCS5A01G318500.3	Wheat	cytosol	64.8	65.66
TraesCS5A01G476800.1	Wheat	cytosol	64.62	65.47
Zm00001d012969_P008	Maize	cytosol	63.87	64.72
AT3G25880.2	Thale cress	cytosol	8.75	63.51
TraesCS5D01G490100.3	Wheat	plastid	63.87	63.4
TraesCS5B01G319000.2	Wheat	golgi	64.99	61.01
TraesCS5D01G324800.3	Wheat	mitochondrion	64.8	60.0
CDY49508	Canola	cytosol	35.38	59.38
HORVU5Hr1G081370.10	Barley	cytosol, nucleus, plastid	64.99	59.25
Solyc06g072080.2.1	Tomato	cytosol	14.53	24.53
Solyc03g019730.2.1	Tomato	mitochondrion	13.97	21.68

Protein Annotations

MapMan:19.2.2.3.3.2	Gene3D:3.40.50.720	InterPro:APP-BP1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0008641	GO:GO:0009987	GO:GO:0019538	GO:GO:0019781	GO:GO:0045116	UniProt:K4DAV3
PFAM:PF00899	PIRSF:PIRSF039099	PANTHER:PTHR10953	PANTHER:PTHR10953:SF29	SUPFAM:SSF69572	EnsemblPlantsGene:Solyc11g072460.1
EnsemblPlants:Solyc11g072460.1.1	InterPro:ThiF_NAD_FAD-bd	UniParc:UPI0002769CB1	InterPro:Ubiquitin-activating_enz	:	:

Description

NEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:K4DAV3]

Coordinates

chr11:+:55630058..55643901

Molecular Weight (calculated)

59705.3 Da

IEP (calculated)

4.653

GRAVY (calculated)

-0.191

Length

537 amino acids

Sequence
(BLAST)

001: MAEPKVKYDR QLRIWGEQGQ AALEKASICL LNCGPTGSET LKNLVLGGVG SITVVDGSKV EVGDLGNNFM VDESSVGESK AKCVCTFLQE LNDAVKAKFI
101: EDCPEELIET NPSFFSQFTL VIATQLVEDS MVKLDRICRE ANIILIFARS YGLMGLVRIS VKEHTVIESK PDHFLDDLRL NNPWPELTRF TETIDLNTTD
201: AVVQKHTPYI VILVKIAEEW ANTHGGNLPS TREEKRQFKD LIKSKMITAD EENYKEAMEA SYKVFSPRGI GVSLQKIIDD SCTEVDSSSS DFWVMVAALK
301: EFIANEGGGE TPLEGSIPDM TSSTELYVNL QKTYQAKAEA DFLVMEQRVR NLLKKIGRDP ASISKANIKN FSKNARKLAV CRYRLIEEEF NSPVQSELQK
401: YLTDEGHGTL QEANSVKVLP ENTAAGLYIL LRAADRFAVN YNKFPSEFDS EMDEDISRLK TTAVSLLNDL GCNSSTVSED LINEMCRYGA SELHVVSAFV
501: GGVASQEVIK LITRQFIPMS GTFIFNGIDN NSQLLLL

Best Arabidopsis Sequence Match ( AT1G05180.1 )
(BLAST)

001: MQAVKRSRRH VEEEPTMVEP KTKYDRQLRI WGEVGQAALE EASICLLNCG PTGSEALKNL VLGGVGSITV VDGSKVQFGD LGNNFMVDAK SVGQSKAKSV
101: CAFLQELNDS VNAKFIEENP DTLITTNPSF FSQFTLVIAT QLVEDSMLKL DRICRDANVK LVLVRSYGLA GFVRISVKEH PIIDSKPDHF LDDLRLNNPW
201: PELKSFVETI DLNVSEPAAA HKHIPYVVIL VKMAEEWAQS HSGNLPSTRE EKKEFKDLVK SKMVSTDEDN YKEAIEAAFK VFAPRGISSE VQKLINDSCA
301: EVNSNSSAFW VMVAALKEFV LNEGGGEAPL EGSIPDMTSS TEHYINLQKI YLAKAEADFL VIEERVKNIL KKIGRDPSSI PKPTIKSFCK NARKLKLCRY
401: RMVEDEFRNP SVTEIQKYLA DEDYSGAMGF YILLRAADRF AANYNKFPGQ FDGGMDEDIS RLKTTALSLL TDLGCNGSVL PDDLIHEMCR FGASEIHVVS
501: AFVGGIASQE VIKLVTKQFV PMLGTYIFNG IDHKSQLLKL

Arabidopsis Description

AXR1NEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WFT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.