Factsheet for Bra020995.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010575.1-P
Bra011708.1-P
Bra014836.1-P
Bra017784.1-P
Bra036361.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05180.1	Bra010575.1-P	AT4G36800.1	12682009
AT1G05180.1	Bra011708.1-P	AT4G36800.1	12682009
AT1G05180.1	Bra014836.1-P	AT4G36800.1	12682009
AT1G05180.1	Bra017784.1-P	AT4G36800.1	12682009
AT1G05180.1	Bra036361.1-P	AT4G36800.1	12682009

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81957	Canola	cytosol	91.6	96.46
CDX97381	Canola	extracellular	73.11	40.65
HORVU3Hr1G105710.1	Barley	cytosol, nucleus	15.97	26.39
Bra015396.1-P	Field mustard	nucleus	74.79	17.84
Bra032482.1-P	Field mustard	cytosol	66.39	16.53
AT1G05180.1	Thale cress	cytosol	71.43	15.74
Solyc12g005870.1.1	Tomato	cytosol	65.55	15.6
KRH56132	Soybean	cytosol	65.55	14.91
Solyc11g072460.1.1	Tomato	cytosol	67.23	14.9
VIT_12s0059g00610.t01	Wine grape	cytosol	64.71	14.72
PGSC0003DMT400070486	Potato	cytosol	66.39	14.71
Bra005592.1-P	Field mustard	cytosol	64.71	14.67
KRH25373	Soybean	cytosol	62.18	14.15
GSMUA_Achr5P02360_001	Banana	cytosol	57.98	13.07
KXG37258	Sorghum	cytosol	57.98	13.04
Zm00001d034640_P003	Maize	cytosol, extracellular	57.98	13.04
Zm00001d012969_P008	Maize	cytosol	57.98	13.02
Os03t0820100-01	Rice	cytosol	57.98	12.99
TraesCS5B01G489700.1	Wheat	cytosol	56.3	12.86
TraesCS5A01G476800.1	Wheat	cytosol	56.3	12.64
TraesCS5A01G318500.3	Wheat	cytosol	55.46	12.45
TraesCS5D01G490100.3	Wheat	plastid	54.62	12.01
TraesCS5B01G319000.2	Wheat	golgi	55.46	11.54
TraesCS5D01G324800.3	Wheat	mitochondrion	55.46	11.38
HORVU5Hr1G081370.10	Barley	cytosol, nucleus, plastid	55.46	11.21
Bra003552.1-P	Field mustard	cytosol	11.76	9.03
Bra013848.1-P	Field mustard	cytosol	16.81	6.21
Bra023205.1-P	Field mustard	cytosol	10.08	5.58

Protein Annotations

EnsemblPlants:Bra020995.1	EnsemblPlants:Bra020995.1-P	EnsemblPlantsGene:Bra020995	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008641	GO:GO:0009987	GO:GO:0019538
GO:GO:0019781	GO:GO:0045116	InterPro:APP-BP1	InterPro:Ubiquitin-activating_enz	PANTHER:PTHR10953	PANTHER:PTHR10953:SF29
SUPFAM:SSF69572	UniParc:UPI000254729D	UniProt:M4DWU9	MapMan:19.2.2.3.3.2	:	:

Description

AT1G05180 (E=3e-040) AXR1 | AXR1 (AUXIN RESISTANT 1); small protein activating enzyme

Coordinates

chrA08:-:10687644..10688347

Molecular Weight (calculated)

13326.2 Da

IEP (calculated)

7.453

GRAVY (calculated)

0.221

Length

119 amino acids

Sequence
(BLAST)

001: MAGYDSVKAK FIEESPDTLI MTSPSFFSQF TLVIATQLVG DSMVKLDRIC REANVKLVFV RSYGLAGIVR VSVKEHTIID SKPDHFLDDL RLNNHGVSQT
101: CHRGRSIVDY SFVILCCLV

Best Arabidopsis Sequence Match ( AT1G05180.1 )
(BLAST)

001: MQAVKRSRRH VEEEPTMVEP KTKYDRQLRI WGEVGQAALE EASICLLNCG PTGSEALKNL VLGGVGSITV VDGSKVQFGD LGNNFMVDAK SVGQSKAKSV
101: CAFLQELNDS VNAKFIEENP DTLITTNPSF FSQFTLVIAT QLVEDSMLKL DRICRDANVK LVLVRSYGLA GFVRISVKEH PIIDSKPDHF LDDLRLNNPW
201: PELKSFVETI DLNVSEPAAA HKHIPYVVIL VKMAEEWAQS HSGNLPSTRE EKKEFKDLVK SKMVSTDEDN YKEAIEAAFK VFAPRGISSE VQKLINDSCA
301: EVNSNSSAFW VMVAALKEFV LNEGGGEAPL EGSIPDMTSS TEHYINLQKI YLAKAEADFL VIEERVKNIL KKIGRDPSSI PKPTIKSFCK NARKLKLCRY
401: RMVEDEFRNP SVTEIQKYLA DEDYSGAMGF YILLRAADRF AANYNKFPGQ FDGGMDEDIS RLKTTALSLL TDLGCNGSVL PDDLIHEMCR FGASEIHVVS
501: AFVGGIASQE VIKLVTKQFV PMLGTYIFNG IDHKSQLLKL

Arabidopsis Description

AXR1NEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WFT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.