Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46837 | Canola | nucleus | 87.96 | 90.82 |
| CDY49510 | Canola | cytosol | 87.78 | 90.63 |
| Bra015396.1-P | Field mustard | nucleus | 82.41 | 89.18 |
| CDY15536 | Canola | cytosol | 85.74 | 88.87 |
| CDY55450 | Canola | cytosol | 85.56 | 88.68 |
| CDY06162 | Canola | cytosol | 84.07 | 87.98 |
| Bra032482.1-P | Field mustard | cytosol | 76.3 | 86.19 |
| CDY10045 | Canola | cytosol | 73.33 | 82.5 |
| AT2G32410.1 | Thale cress | nucleus | 77.78 | 80.31 |
| CDX98913 | Canola | cytosol | 14.44 | 75.0 |
| CDY31150 | Canola | cytosol | 14.44 | 75.0 |
| Bra020995.1-P | Field mustard | cytosol | 15.74 | 71.43 |
| CDX81957 | Canola | cytosol | 14.63 | 69.91 |
| HORVU3Hr1G105710.1 | Barley | cytosol, nucleus | 9.26 | 69.44 |
| GSMUA_Achr5P02360_001 | Banana | cytosol | 65.74 | 67.23 |
| Os03t0820100-01 | Rice | cytosol | 65.74 | 66.86 |
| KXG37258 | Sorghum | cytosol | 65.37 | 66.73 |
| AT3G25880.2 | Thale cress | cytosol | 9.07 | 66.22 |
| Zm00001d034640_P003 | Maize | cytosol, extracellular | 64.44 | 65.78 |
| TraesCS5A01G318500.3 | Wheat | cytosol | 64.07 | 65.28 |
| Zm00001d012969_P008 | Maize | cytosol | 64.07 | 65.28 |
| TraesCS5B01G489700.1 | Wheat | cytosol | 62.41 | 64.68 |
| TraesCS5A01G476800.1 | Wheat | cytosol | 62.96 | 64.15 |
| TraesCS5D01G490100.3 | Wheat | plastid | 62.59 | 62.48 |
| TraesCS5B01G319000.2 | Wheat | golgi | 64.07 | 60.49 |
| TraesCS5D01G324800.3 | Wheat | mitochondrion | 63.7 | 59.31 |
| HORVU5Hr1G081370.10 | Barley | cytosol, nucleus, plastid | 64.07 | 58.74 |
| CDX97381 | Canola | extracellular | 22.04 | 55.61 |
| AT4G24940.1 | Thale cress | cytosol | 15.19 | 25.47 |
| AT5G50680.1 | Thale cress | cytosol | 13.7 | 23.12 |
| AT5G50580.2 | Thale cress | cytosol | 13.7 | 23.12 |
Protein Annotations
| MapMan:19.2.2.3.3.2 | Gene3D:3.40.50.720 | EntrezGene:839286 | UniProt:A0A178WFT2 | ProteinID:AAB71460.1 | ProteinID:AEE27800.1 |
| InterPro:APP-BP1 | ArrayExpress:AT1G05180 | EnsemblPlantsGene:AT1G05180 | RefSeq:AT1G05180 | TAIR:AT1G05180 | RefSeq:AT1G05180-TAIR-G |
| EnsemblPlants:AT1G05180.1 | TAIR:AT1G05180.1 | Symbol:AXR1 | EMBL:AY050379 | GO:GO:0000003 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0006281 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0007049 | GO:GO:0007131 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008641 | GO:GO:0009414 |
| GO:GO:0009628 | GO:GO:0009653 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009735 | GO:GO:0009965 |
| GO:GO:0009987 | GO:GO:0010252 | GO:GO:0016043 | GO:GO:0019538 | GO:GO:0019781 | GO:GO:0045116 |
| EMBL:L13922 | RefSeq:NP_172010.1 | ProteinID:OAP16343.1 | UniProt:P42744 | PFAM:PF00899 | PIRSF:PIRSF039099 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR10953 | PANTHER:PTHR10953:SF29 | SUPFAM:SSF69572 | InterPro:ThiF_NAD_FAD-bd | UniParc:UPI0000000BBD | InterPro:Ubiquitin-activating_enz |
Description
AXR1NEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WFT2]
Coordinates
chr1:-:1498114..1501953
Molecular Weight (calculated)
60038.1 Da
IEP (calculated)
5.725
GRAVY (calculated)
-0.181
Length
540 amino acids
Sequence
(BLAST)
(BLAST)
001: MQAVKRSRRH VEEEPTMVEP KTKYDRQLRI WGEVGQAALE EASICLLNCG PTGSEALKNL VLGGVGSITV VDGSKVQFGD LGNNFMVDAK SVGQSKAKSV
101: CAFLQELNDS VNAKFIEENP DTLITTNPSF FSQFTLVIAT QLVEDSMLKL DRICRDANVK LVLVRSYGLA GFVRISVKEH PIIDSKPDHF LDDLRLNNPW
201: PELKSFVETI DLNVSEPAAA HKHIPYVVIL VKMAEEWAQS HSGNLPSTRE EKKEFKDLVK SKMVSTDEDN YKEAIEAAFK VFAPRGISSE VQKLINDSCA
301: EVNSNSSAFW VMVAALKEFV LNEGGGEAPL EGSIPDMTSS TEHYINLQKI YLAKAEADFL VIEERVKNIL KKIGRDPSSI PKPTIKSFCK NARKLKLCRY
401: RMVEDEFRNP SVTEIQKYLA DEDYSGAMGF YILLRAADRF AANYNKFPGQ FDGGMDEDIS RLKTTALSLL TDLGCNGSVL PDDLIHEMCR FGASEIHVVS
501: AFVGGIASQE VIKLVTKQFV PMLGTYIFNG IDHKSQLLKL
101: CAFLQELNDS VNAKFIEENP DTLITTNPSF FSQFTLVIAT QLVEDSMLKL DRICRDANVK LVLVRSYGLA GFVRISVKEH PIIDSKPDHF LDDLRLNNPW
201: PELKSFVETI DLNVSEPAAA HKHIPYVVIL VKMAEEWAQS HSGNLPSTRE EKKEFKDLVK SKMVSTDEDN YKEAIEAAFK VFAPRGISSE VQKLINDSCA
301: EVNSNSSAFW VMVAALKEFV LNEGGGEAPL EGSIPDMTSS TEHYINLQKI YLAKAEADFL VIEERVKNIL KKIGRDPSSI PKPTIKSFCK NARKLKLCRY
401: RMVEDEFRNP SVTEIQKYLA DEDYSGAMGF YILLRAADRF AANYNKFPGQ FDGGMDEDIS RLKTTALSLL TDLGCNGSVL PDDLIHEMCR FGASEIHVVS
501: AFVGGIASQE VIKLVTKQFV PMLGTYIFNG IDHKSQLLKL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.