Factsheet for Zm00001d034640_P003

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d014671_P001
Zm00001d036481_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05180.1	Zm00001d014671_P001	AT4G36800.1	12682009
AT1G05180.1	Zm00001d036481_P001	AT4G36800.1	12682009

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012969_P008	Maize	cytosol	93.76	93.58
HORVU3Hr1G105710.1	Barley	cytosol, nucleus	12.48	91.67
TraesCS5A01G318500.3	Wheat	cytosol	87.15	86.98
TraesCS5A01G476800.1	Wheat	cytosol	87.15	86.98
TraesCS5B01G489700.1	Wheat	cytosol	85.63	86.95
Os03t0820100-01	Rice	cytosol	86.96	86.63
TraesCS5D01G490100.3	Wheat	plastid	86.77	84.84
TraesCS5B01G319000.2	Wheat	golgi	86.58	80.07
TraesCS5D01G324800.3	Wheat	mitochondrion	86.96	79.31
HORVU5Hr1G081370.10	Barley	cytosol, nucleus, plastid	87.52	78.61
GSMUA_Achr5P02360_001	Banana	cytosol	71.83	71.97
VIT_12s0059g00610.t01	Wine grape	cytosol	68.43	69.22
KRH56132	Soybean	cytosol	67.49	68.26
Bra015396.1-P	Field mustard	nucleus	63.71	67.54
KRH25373	Soybean	cytosol	66.73	67.5
CDY46837	Canola	nucleus	66.54	67.3
CDY55450	Canola	cytosol	66.16	67.18
CDY15536	Canola	cytosol	65.78	66.79
CDY49510	Canola	cytosol	65.78	66.54
Solyc12g005870.1.1	Tomato	cytosol	62.57	66.2
PGSC0003DMT400070486	Potato	cytosol	66.54	65.55
CDY06162	Canola	cytosol	63.71	65.31
Bra032482.1-P	Field mustard	cytosol	58.79	65.06
Solyc11g072460.1.1	Tomato	cytosol	65.97	64.99
Bra005592.1-P	Field mustard	cytosol	64.27	64.76
AT1G05180.1	Thale cress	cytosol	65.78	64.44
AT2G32410.1	Thale cress	nucleus	63.71	64.44
CDY48269	Canola	cytosol	63.89	64.38
CDY12209	Canola	cytosol	64.46	63.86
CDY10045	Canola	cytosol	56.9	62.71
CDY31150	Canola	cytosol	12.1	61.54
CDX98913	Canola	cytosol	12.1	61.54
Bra020995.1-P	Field mustard	cytosol	13.04	57.98
AT3G25880.2	Thale cress	cytosol	7.75	55.41
CDX81957	Canola	cytosol	11.72	54.87
CDY49508	Canola	cytosol	32.7	54.06
CDX97381	Canola	extracellular	18.15	44.86
Zm00001d049163_P001	Maize	cytosol, extracellular	16.26	25.83

Protein Annotations

EntrezGene:100193236	MapMan:19.2.2.3.3.2	Gene3D:3.40.50.720	UniProt:A0A1D6L9R2	InterPro:APP-BP1	GO:GO:0003674
GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008641	GO:GO:0009987
GO:GO:0019538	GO:GO:0019781	GO:GO:0045116	ProteinID:ONM10903.1	PFAM:PF00899	PIRSF:PIRSF039099
PANTHER:PTHR10953	PANTHER:PTHR10953:SF29	SUPFAM:SSF69572	InterPro:ThiF_NAD_FAD-bd	UniParc:UPI000221554F	InterPro:Ubiquitin-activating_enz
EnsemblPlantsGene:Zm00001d034640	EnsemblPlants:Zm00001d034640_P003	EnsemblPlants:Zm00001d034640_T003	SEG:seg	:	:

Description

NEDD8-activating enzyme E1 regulatory subunit AXR1

Coordinates

chr1:+:298682827..298693357

Molecular Weight (calculated)

58955.4 Da

IEP (calculated)

4.990

GRAVY (calculated)

-0.150

Length

529 amino acids

Sequence
(BLAST)

001: MAATGVVAEP KTKYDRQLRI WGDQGQAALE KASICLLNCG PTGTEALKNL VLGGIGSVTV VDGSKVESSD LGNNFLLDEG CLGQPRAKSI CSFLQELNDA
101: VKAKFVEESP AHLIDTNPSF FSQFTVVIAT QLPESFLLKL DYICRKADIV LVAARSYGLT GLVRVSVKEH CVIESKPDHF LDDLRLHNPW TELKQFAKSI
201: DINDKDPVVH KNTPYIVILV RLAEKWADAH DGNLPSTRQE KKEFKDLIRA HMLNVDEENY KEAVDSSYKV SVTPGINNEI RQIIDDDSAE VNSSSSDFWI
301: LVAALKEFIA KEGNGELPLE GTIPDMTSLT EYYVSLQKIY QAKAEFDCLA LEHHVKEILK RIGRDPDSIS RAYIKTFCKN SRKLRVSRYR SFEEEFSSPF
401: VPEIQRYFTD EDYSYATNFY ILLRAVDRLA ANYSRLPGIF DSEIDEDIPR LKTVAASVAS EMGLNGASLS EDLITEMCRF GGAEIHPVAA FVGGVASQEV
501: IKLVTKQFVP LPGTFIFNGI DLKSQVLML

Best Arabidopsis Sequence Match ( AT1G05180.1 )
(BLAST)

001: MQAVKRSRRH VEEEPTMVEP KTKYDRQLRI WGEVGQAALE EASICLLNCG PTGSEALKNL VLGGVGSITV VDGSKVQFGD LGNNFMVDAK SVGQSKAKSV
101: CAFLQELNDS VNAKFIEENP DTLITTNPSF FSQFTLVIAT QLVEDSMLKL DRICRDANVK LVLVRSYGLA GFVRISVKEH PIIDSKPDHF LDDLRLNNPW
201: PELKSFVETI DLNVSEPAAA HKHIPYVVIL VKMAEEWAQS HSGNLPSTRE EKKEFKDLVK SKMVSTDEDN YKEAIEAAFK VFAPRGISSE VQKLINDSCA
301: EVNSNSSAFW VMVAALKEFV LNEGGGEAPL EGSIPDMTSS TEHYINLQKI YLAKAEADFL VIEERVKNIL KKIGRDPSSI PKPTIKSFCK NARKLKLCRY
401: RMVEDEFRNP SVTEIQKYLA DEDYSGAMGF YILLRAADRF AANYNKFPGQ FDGGMDEDIS RLKTTALSLL TDLGCNGSVL PDDLIHEMCR FGASEIHVVS
501: AFVGGIASQE VIKLVTKQFV PMLGTYIFNG IDHKSQLLKL

Arabidopsis Description

AXR1NEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WFT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.