Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G105710.1 | Barley | cytosol, nucleus | 13.51 | 13.89 |
| Solyc12g005870.1.1 | Tomato | cytosol | 63.51 | 9.4 |
| AT2G32410.1 | Thale cress | nucleus | 64.86 | 9.18 |
| AT1G05180.1 | Thale cress | cytosol | 66.22 | 9.07 |
| KRH25373 | Soybean | cytosol | 63.51 | 8.99 |
| KRH56132 | Soybean | cytosol | 63.51 | 8.99 |
| Solyc11g072460.1.1 | Tomato | cytosol | 63.51 | 8.75 |
| PGSC0003DMT400070486 | Potato | cytosol | 63.51 | 8.75 |
| VIT_12s0059g00610.t01 | Wine grape | cytosol | 60.81 | 8.6 |
| GSMUA_Achr5P02360_001 | Banana | cytosol | 59.46 | 8.33 |
| Os03t0820100-01 | Rice | cytosol | 56.76 | 7.91 |
| TraesCS5B01G489700.1 | Wheat | cytosol | 55.41 | 7.87 |
| KXG37258 | Sorghum | cytosol | 55.41 | 7.75 |
| Zm00001d034640_P003 | Maize | cytosol, extracellular | 55.41 | 7.75 |
| TraesCS5A01G318500.3 | Wheat | cytosol | 55.41 | 7.74 |
| TraesCS5A01G476800.1 | Wheat | cytosol | 55.41 | 7.74 |
| Zm00001d012969_P008 | Maize | cytosol | 55.41 | 7.74 |
| TraesCS5B01G319000.2 | Wheat | golgi | 58.11 | 7.52 |
| TraesCS5D01G490100.3 | Wheat | plastid | 54.05 | 7.39 |
| TraesCS5D01G324800.3 | Wheat | mitochondrion | 55.41 | 7.07 |
| HORVU5Hr1G081370.10 | Barley | cytosol, nucleus, plastid | 55.41 | 6.96 |
| AT4G24940.1 | Thale cress | cytosol | 25.68 | 5.9 |
| AT5G50680.1 | Thale cress | cytosol | 24.32 | 5.62 |
| AT5G50580.2 | Thale cress | cytosol | 24.32 | 5.62 |
| CDY49508 | Canola | cytosol | 5.41 | 1.25 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EntrezGene:822183 | UniProt:A0A1I9LPS6 | ProteinID:ANM64584.1 | InterPro:APP-BP1 |
| ArrayExpress:AT3G25880 | EnsemblPlantsGene:AT3G25880 | RefSeq:AT3G25880 | TAIR:AT3G25880 | RefSeq:AT3G25880-TAIR-G | EnsemblPlants:AT3G25880.2 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008641 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0019781 | GO:GO:0045116 | RefSeq:NP_001326600.1 | PFAM:PF00899 |
| PANTHER:PTHR10953 | PANTHER:PTHR10953:SF29 | SUPFAM:SSF69572 | InterPro:ThiF_NAD_FAD-bd | UniParc:UPI000848F188 | InterPro:Ubiquitin-activating_enz |
Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPS6]
Coordinates
chr3:-:9469105..9470033
Molecular Weight (calculated)
8310.2 Da
IEP (calculated)
8.217
GRAVY (calculated)
0.092
Length
74 amino acids
Sequence
(BLAST)
(BLAST)
1: MMEPKAKYDR QLMYTIQGTL EEASICLLNC GPIGSNALKN LVLGGVGSIT IVEGSKVLIG DIWKQFHSWW KIQW
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.