CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25373	Soybean	cytosol	96.75	96.75
VIT_12s0059g00610.t01	Wine grape	cytosol	84.13	84.13
Bra015396.1-P	Field mustard	nucleus	74.19	77.76
Solyc12g005870.1.1	Tomato	cytosol	73.61	77.0
PGSC0003DMT400070486	Potato	cytosol	78.59	76.54
HORVU3Hr1G105710.1	Barley	cytosol, nucleus	10.52	76.39
Bra032482.1-P	Field mustard	cytosol	69.22	75.73
Solyc11g072460.1.1	Tomato	cytosol	77.44	75.42
Bra005592.1-P	Field mustard	cytosol	73.81	73.52
GSMUA_Achr5P02360_001	Banana	cytosol	71.32	70.64
Os03t0820100-01	Rice	cytosol	69.41	68.36
KXG37258	Sorghum	cytosol	68.45	67.67
Zm00001d034640_P003	Maize	cytosol, extracellular	68.26	67.49
TraesCS5A01G318500.3	Wheat	cytosol	67.69	66.79
TraesCS5B01G489700.1	Wheat	cytosol	66.35	66.6
TraesCS5A01G476800.1	Wheat	cytosol	66.92	66.04
Bra020995.1-P	Field mustard	cytosol	14.91	65.55
Zm00001d012969_P008	Maize	cytosol	66.16	65.28
TraesCS5D01G490100.3	Wheat	plastid	66.54	64.33
AT3G25880.2	Thale cress	cytosol	8.99	63.51
TraesCS5B01G319000.2	Wheat	golgi	68.07	62.24
CDY49508	Canola	cytosol	37.67	61.56
TraesCS5D01G324800.3	Wheat	mitochondrion	67.69	61.03
HORVU5Hr1G081370.10	Barley	cytosol, nucleus, plastid	67.5	59.93
KRH41120	Soybean	nucleus	12.05	22.42
KRH59806	Soybean	cytosol, nucleus	14.15	22.36

Protein Annotations

EntrezGene:100793799	MapMan:19.2.2.3.3.2	Gene3D:3.40.50.720	EMBL:ACUP02004100	InterPro:APP-BP1	EnsemblPlantsGene:GLYMA_06G305800
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008641	GO:GO:0009987	GO:GO:0019538
GO:GO:0019781	GO:GO:0045116	UniProt:I1KFD2	EnsemblPlants:KRH56132	ProteinID:KRH56132	ProteinID:KRH56132.1
PFAM:PF00899	PIRSF:PIRSF039099	PANTHER:PTHR10953	PANTHER:PTHR10953:SF29	SUPFAM:SSF69572	InterPro:ThiF_NAD_FAD-bd
UniParc:UPI000233A775	InterPro:Ubiquitin-activating_enz	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:49468445..49474776

Molecular Weight (calculated)

57871.2 Da

IEP (calculated)

4.921

GRAVY (calculated)

-0.147

Length

523 amino acids

Sequence
(BLAST)

001: MAEPKVKYDR QLRIWGEQGQ AALEKSSICL LNCGPTGSET LKNLVLGGVG SITVVDGSKV EVGDLGNNFL VDEASLGKSK AKCVCSFLQE LNDAVKAKFV
101: EESPETLIET NPSFFSQFTL VVATQLVENS MIKLDRICRE ANVMLIFARS YGLTGFVRIS VKEHAVIESK PDHFLDDLRL NNPWPELKRF ADDIDLNVQD
201: PVAHKHIPYV VILVKMADEW AKSHGGRLPS TREEKKEFKE LLKAGMVAQD EDNYKEAIDS AFKVFAPRGI SLESQQILND SSAEVDSNSS DFWVLVTALK
301: DFIANEGGGD APLEGSIPDM TSSTEQYVNL QNIYHAKAEA DFLVIERLVR STLKKIGRDS NSISKSTIKS FCKNARKLKV CRYRLIEDEF NSPNLPELQK
401: YLTDEDYSIA VGIYILLRAV DRFAANYNSF PGQFDSAMDE DIPRLKSTAI ALLTDLGCNG ATLAEDLINE MCRFGAAELH AVAALVGGIA SQEVIKLITK
501: QFVPMSGTYI FNGIDHKSQL LSL

Best Arabidopsis Sequence Match ( AT1G05180.1 )
(BLAST)

001: MQAVKRSRRH VEEEPTMVEP KTKYDRQLRI WGEVGQAALE EASICLLNCG PTGSEALKNL VLGGVGSITV VDGSKVQFGD LGNNFMVDAK SVGQSKAKSV
101: CAFLQELNDS VNAKFIEENP DTLITTNPSF FSQFTLVIAT QLVEDSMLKL DRICRDANVK LVLVRSYGLA GFVRISVKEH PIIDSKPDHF LDDLRLNNPW
201: PELKSFVETI DLNVSEPAAA HKHIPYVVIL VKMAEEWAQS HSGNLPSTRE EKKEFKDLVK SKMVSTDEDN YKEAIEAAFK VFAPRGISSE VQKLINDSCA
301: EVNSNSSAFW VMVAALKEFV LNEGGGEAPL EGSIPDMTSS TEHYINLQKI YLAKAEADFL VIEERVKNIL KKIGRDPSSI PKPTIKSFCK NARKLKLCRY
401: RMVEDEFRNP SVTEIQKYLA DEDYSGAMGF YILLRAADRF AANYNKFPGQ FDGGMDEDIS RLKTTALSLL TDLGCNGSVL PDDLIHEMCR FGASEIHVVS
501: AFVGGIASQE VIKLVTKQFV PMLGTYIFNG IDHKSQLLKL

Arabidopsis Description

AXR1NEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WFT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.