CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56132	Soybean	cytosol	96.75	96.75
VIT_12s0059g00610.t01	Wine grape	cytosol	82.79	82.79
HORVU3Hr1G105710.1	Barley	cytosol, nucleus	10.52	76.39
Bra015396.1-P	Field mustard	nucleus	72.85	76.35
Solyc12g005870.1.1	Tomato	cytosol	72.85	76.2
PGSC0003DMT400070486	Potato	cytosol	78.01	75.98
Solyc11g072460.1.1	Tomato	cytosol	76.67	74.67
Bra032482.1-P	Field mustard	cytosol	67.69	74.06
Bra005592.1-P	Field mustard	cytosol	72.28	72.0
GSMUA_Achr5P02360_001	Banana	cytosol	71.13	70.45
Os03t0820100-01	Rice	cytosol	68.64	67.61
KXG37258	Sorghum	cytosol	67.88	67.11
Zm00001d034640_P003	Maize	cytosol, extracellular	67.5	66.73
TraesCS5A01G318500.3	Wheat	cytosol	66.92	66.04
TraesCS5B01G489700.1	Wheat	cytosol	65.58	65.83
TraesCS5A01G476800.1	Wheat	cytosol	66.16	65.28
Zm00001d012969_P008	Maize	cytosol	65.58	64.72
TraesCS5D01G490100.3	Wheat	plastid	65.77	63.59
AT3G25880.2	Thale cress	cytosol	8.99	63.51
Bra020995.1-P	Field mustard	cytosol	14.15	62.18
TraesCS5B01G319000.2	Wheat	golgi	67.3	61.54
CDY49508	Canola	cytosol	37.09	60.62
TraesCS5D01G324800.3	Wheat	mitochondrion	66.92	60.34
HORVU5Hr1G081370.10	Barley	cytosol, nucleus, plastid	66.73	59.25
KRH59806	Soybean	cytosol, nucleus	13.77	21.75
KRH41120	Soybean	nucleus	11.66	21.71

Protein Annotations

EntrezGene:100777973	MapMan:19.2.2.3.3.2	Gene3D:3.40.50.720	EMBL:ACUP02007247	InterPro:APP-BP1	EnsemblPlantsGene:GLYMA_12G098800
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008641	GO:GO:0009987	GO:GO:0019538
GO:GO:0019781	GO:GO:0045116	UniProt:I1LRQ2	EnsemblPlants:KRH25373	ProteinID:KRH25373	ProteinID:KRH25373.1
PFAM:PF00899	PIRSF:PIRSF039099	PANTHER:PTHR10953	PANTHER:PTHR10953:SF29	SUPFAM:SSF69572	InterPro:ThiF_NAD_FAD-bd
UniParc:UPI000233C42D	InterPro:Ubiquitin-activating_enz	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:8522974..8536798

Molecular Weight (calculated)

57983.4 Da

IEP (calculated)

4.863

GRAVY (calculated)

-0.125

Length

523 amino acids

Sequence
(BLAST)

001: MAEPKVKYDR QLRIWGEQGQ AALEKSSICL LNCGPTGSET LKNLVLGGVG SITVVDGSKV EAGDLGNNFL VDEASLGKSK AKCVCSFLQE LNDAVKAKFV
101: EESPETLIET NPSFFSQFTL VVATQLMENS MIKLDQICRE VNVMLIFARS YGLTGFVRIS VKEHAVIESK PEHFLDDLRL NNPWPKLKRF ADDIDLNVQD
201: PVAHKHIPYV VILVKMADEW AQSHGGRLPL TREEKKEFKE FLKAGMVAQD EDNYKEAIDS AFKVFAPQGI SLELQQILND SSAEVDSNSS DFWVLVTALK
301: DFIANEGGGE APLEGSIPDM TSSTEQYVNL QNIYHAKAEA DFLVIERLVR STLKKIGRDS NSISKSIIKS FCKNARKLKV CRYRLIEDEF NSPNLPELQK
401: YLTDEDYSIA VGIYILLRAV DRFAANYNSF PGQFDSAMDE DIPRLKSTAI GLLNDLGCNG ATLAEDLINE MCRFGAAELH AVAALVGGIA SQEVIKLITR
501: QFVPMSGTFI FNGIDHKSQL LSL

Best Arabidopsis Sequence Match ( AT1G05180.1 )
(BLAST)

001: MQAVKRSRRH VEEEPTMVEP KTKYDRQLRI WGEVGQAALE EASICLLNCG PTGSEALKNL VLGGVGSITV VDGSKVQFGD LGNNFMVDAK SVGQSKAKSV
101: CAFLQELNDS VNAKFIEENP DTLITTNPSF FSQFTLVIAT QLVEDSMLKL DRICRDANVK LVLVRSYGLA GFVRISVKEH PIIDSKPDHF LDDLRLNNPW
201: PELKSFVETI DLNVSEPAAA HKHIPYVVIL VKMAEEWAQS HSGNLPSTRE EKKEFKDLVK SKMVSTDEDN YKEAIEAAFK VFAPRGISSE VQKLINDSCA
301: EVNSNSSAFW VMVAALKEFV LNEGGGEAPL EGSIPDMTSS TEHYINLQKI YLAKAEADFL VIEERVKNIL KKIGRDPSSI PKPTIKSFCK NARKLKLCRY
401: RMVEDEFRNP SVTEIQKYLA DEDYSGAMGF YILLRAADRF AANYNKFPGQ FDGGMDEDIS RLKTTALSLL TDLGCNGSVL PDDLIHEMCR FGASEIHVVS
501: AFVGGIASQE VIKLVTKQFV PMLGTYIFNG IDHKSQLLKL

Arabidopsis Description

AXR1NEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WFT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.