Factsheet for Bra032482.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010575.1-P
Bra011708.1-P
Bra014836.1-P
Bra017784.1-P
Bra036361.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05180.1	Bra010575.1-P	AT4G36800.1	12682009
AT1G05180.1	Bra011708.1-P	AT4G36800.1	12682009
AT1G05180.1	Bra014836.1-P	AT4G36800.1	12682009
AT1G05180.1	Bra017784.1-P	AT4G36800.1	12682009
AT1G05180.1	Bra036361.1-P	AT4G36800.1	12682009

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06162	Canola	cytosol	94.35	87.4
Bra015396.1-P	Field mustard	nucleus	83.68	80.16
AT1G05180.1	Thale cress	cytosol	86.19	76.3
Bra005592.1-P	Field mustard	cytosol	79.92	72.76
VIT_12s0059g00610.t01	Wine grape	cytosol	77.82	71.13
HORVU3Hr1G105710.1	Barley	cytosol, nucleus	10.67	70.83
KRH56132	Soybean	cytosol	75.73	69.22
KRH25373	Soybean	cytosol	74.06	67.69
Bra020995.1-P	Field mustard	cytosol	16.53	66.39
Solyc12g005870.1.1	Tomato	cytosol	69.25	66.2
PGSC0003DMT400070486	Potato	cytosol	73.64	65.55
Solyc11g072460.1.1	Tomato	cytosol	72.59	64.62
GSMUA_Achr5P02360_001	Banana	cytosol	68.2	61.74
Os03t0820100-01	Rice	cytosol	66.74	60.08
TraesCS5B01G489700.1	Wheat	cytosol	65.27	59.88
TraesCS5A01G476800.1	Wheat	cytosol	66.32	59.81
TraesCS5A01G318500.3	Wheat	cytosol	66.32	59.81
KXG37258	Sorghum	cytosol	65.69	59.36
Zm00001d034640_P003	Maize	cytosol, extracellular	65.06	58.79
Zm00001d012969_P008	Maize	cytosol	65.06	58.68
TraesCS5D01G490100.3	Wheat	plastid	65.69	58.04
TraesCS5B01G319000.2	Wheat	golgi	66.53	55.59
TraesCS5D01G324800.3	Wheat	mitochondrion	66.11	54.48
HORVU5Hr1G081370.10	Barley	cytosol, nucleus, plastid	66.74	54.16
Bra013848.1-P	Field mustard	cytosol	12.55	18.63
Bra003552.1-P	Field mustard	cytosol	5.02	15.48
Bra023205.1-P	Field mustard	cytosol	4.81	10.7

Protein Annotations

MapMan:19.2.2.3.3.2	Gene3D:3.40.50.720	InterPro:APP-BP1	EnsemblPlantsGene:Bra032482	EnsemblPlants:Bra032482.1	EnsemblPlants:Bra032482.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008641
GO:GO:0009987	GO:GO:0019538	GO:GO:0019781	GO:GO:0045116	UniProt:M4EUK0	PFAM:PF00899
PIRSF:PIRSF039099	PANTHER:PTHR10953	PANTHER:PTHR10953:SF29	SUPFAM:SSF69572	InterPro:ThiF_NAD_FAD-bd	UniParc:UPI00025435A7
InterPro:Ubiquitin-activating_enz	:	:	:	:	:

Description

AT1G05180 (E=1e-226) AXR1 | AXR1 (AUXIN RESISTANT 1); small protein activating enzyme

Coordinates

chrA09:+:36256127..36259194

Molecular Weight (calculated)

53408.9 Da

IEP (calculated)

4.954

GRAVY (calculated)

-0.231

Length

478 amino acids

Sequence
(BLAST)

001: MPPMKKEEAT MSEPKTKYDR QLRIWGELGQ AALEEASICL LHCGPTGSEA LKNLVLGGVG SFTVVDGSKV ELGDLGNNFM VDERSVGQSK AKSVCAFLQE
101: LNDSVKATFI EENPDTLITT NASFFSQFTL VIATQLVEDS MVKLDRICRE ANVMLVFARS YGLSGFLRVS EHTVIDSKPD HFLDDLRLNN PWPELKSFVE
201: TIDLNVSDPV AHKHIPYVVI LVKMADEWAQ SHSGNLPSIR EEKKEFKDLV KSKMISMDED NYKEAIEAAF KVFAPRGISS EIQQICNDTC SELSSNSSDF
301: WVMVAALKEF ISNEGDGEAP LEGSIPDMTS STEHYINLQK IYQAKAEADV LVMEKRVRNI LKKIGRDPSS ISKPAIKSFC KNARKLKVCR YRMVEDEFSN
401: PSVTEIQKCL AGEDYSGAMG FYVLLRAVDR FTANYNKFPG QFDAGMDEDI SLVTKQFVPM LGTYIFNGID HKSQLLTL

Best Arabidopsis Sequence Match ( AT1G05180.1 )
(BLAST)

001: MQAVKRSRRH VEEEPTMVEP KTKYDRQLRI WGEVGQAALE EASICLLNCG PTGSEALKNL VLGGVGSITV VDGSKVQFGD LGNNFMVDAK SVGQSKAKSV
101: CAFLQELNDS VNAKFIEENP DTLITTNPSF FSQFTLVIAT QLVEDSMLKL DRICRDANVK LVLVRSYGLA GFVRISVKEH PIIDSKPDHF LDDLRLNNPW
201: PELKSFVETI DLNVSEPAAA HKHIPYVVIL VKMAEEWAQS HSGNLPSTRE EKKEFKDLVK SKMVSTDEDN YKEAIEAAFK VFAPRGISSE VQKLINDSCA
301: EVNSNSSAFW VMVAALKEFV LNEGGGEAPL EGSIPDMTSS TEHYINLQKI YLAKAEADFL VIEERVKNIL KKIGRDPSSI PKPTIKSFCK NARKLKLCRY
401: RMVEDEFRNP SVTEIQKYLA DEDYSGAMGF YILLRAADRF AANYNKFPGQ FDGGMDEDIS RLKTTALSLL TDLGCNGSVL PDDLIHEMCR FGASEIHVVS
501: AFVGGIASQE VIKLVTKQFV PMLGTYIFNG IDHKSQLLKL

Arabidopsis Description

AXR1NEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WFT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.