Factsheet for Bra015396.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010575.1-P
Bra011708.1-P
Bra014836.1-P
Bra017784.1-P
Bra036361.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05180.1	Bra010575.1-P	AT4G36800.1	12682009
AT1G05180.1	Bra011708.1-P	AT4G36800.1	12682009
AT1G05180.1	Bra014836.1-P	AT4G36800.1	12682009
AT1G05180.1	Bra017784.1-P	AT4G36800.1	12682009
AT1G05180.1	Bra036361.1-P	AT4G36800.1	12682009

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46837	Canola	nucleus	97.8	93.31
Bra032482.1-P	Field mustard	cytosol	80.16	83.68
AT1G05180.1	Thale cress	cytosol	89.18	82.41
VIT_12s0059g00610.t01	Wine grape	cytosol	79.36	75.72
Bra005592.1-P	Field mustard	cytosol	79.16	75.24
Bra020995.1-P	Field mustard	cytosol	17.84	74.79
KRH56132	Soybean	cytosol	77.76	74.19
HORVU3Hr1G105710.1	Barley	cytosol, nucleus	10.62	73.61
KRH25373	Soybean	cytosol	76.35	72.85
Solyc12g005870.1.1	Tomato	cytosol	72.34	72.2
PGSC0003DMT400070486	Potato	cytosol	75.55	70.2
Solyc11g072460.1.1	Tomato	cytosol	74.35	69.09
GSMUA_Achr5P02360_001	Banana	cytosol	69.14	65.34
KXG37258	Sorghum	cytosol	68.14	64.27
Zm00001d034640_P003	Maize	cytosol, extracellular	67.54	63.71
Os03t0820100-01	Rice	cytosol	67.54	63.47
Zm00001d012969_P008	Maize	cytosol	67.13	63.21
TraesCS5A01G318500.3	Wheat	cytosol	66.73	62.83
TraesCS5B01G489700.1	Wheat	cytosol	65.53	62.76
TraesCS5A01G476800.1	Wheat	cytosol	65.93	62.08
TraesCS5D01G490100.3	Wheat	plastid	65.73	60.63
TraesCS5B01G319000.2	Wheat	golgi	66.73	58.22
TraesCS5D01G324800.3	Wheat	mitochondrion	66.53	57.24
HORVU5Hr1G081370.10	Barley	cytosol, nucleus, plastid	67.13	56.88
Bra013848.1-P	Field mustard	cytosol	15.03	23.29
Bra003552.1-P	Field mustard	cytosol	7.21	23.23
Bra023205.1-P	Field mustard	cytosol	7.01	16.28

Protein Annotations

MapMan:19.2.2.3.3.2	Gene3D:3.40.50.720	InterPro:APP-BP1	EnsemblPlantsGene:Bra015396	EnsemblPlants:Bra015396.1	EnsemblPlants:Bra015396.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008641
GO:GO:0009987	GO:GO:0019538	GO:GO:0019781	GO:GO:0045116	UniProt:M4DFX3	PFAM:PF00899
PIRSF:PIRSF039099	PANTHER:PTHR10953	PANTHER:PTHR10953:SF29	SUPFAM:SSF69572	InterPro:ThiF_NAD_FAD-bd	UniParc:UPI0002543ACB
InterPro:Ubiquitin-activating_enz	:	:	:	:	:

Description

AT1G05180 (E=1e-128) AXR1 | AXR1 (AUXIN RESISTANT 1); small protein activating enzyme

Coordinates

chrA10:+:2081755..2084732

Molecular Weight (calculated)

55100.0 Da

IEP (calculated)

4.840

GRAVY (calculated)

-0.104

Length

499 amino acids

Sequence
(BLAST)

001: MSEAKTKYDR QLRIWGEVGQ AALEEASICL LNCGPTGSEA LKNLVLGGVG SITVVDGSKV ELGDLGNNFM VDEGSVGQSK AKSVCAFLQE LNDSVKAKFI
101: EEDPDTLIMT NPSFFSHFTL VIATQLVEES MVKLDRICRE ANVKLVFARS YGLAGFVRVS VKEHTIIDSK PDHFLDDLRL NNPWPELKSF VETIDLNVSD
201: PVAHKHIPYV VILVKMADEW TQSHSGNLPS TREEKKEFKL FLVSIPGSEI QQISSDTCAE PSSNSSDIWV MVAALKEFVS NEGDGEAPLE GSIPDMTSST
301: EHYINLQKIY LAKAEADFLV MEERVKSILK KIGRDPSSIS KPTIKSFCKN ARKLKVCRYR MVEDEFSNPS VTEIQKCLAD EDYSGAMGFY ILLRAVDRFT
401: ANYNKFPGQF DGGMDEDISR LKTTALSLLT DLGCNGSVLP DDLINEMCRF GASELHVVAA FLGGIASQEA IKLVTKQFVP MLGTYIFNGI DHKSQLLAL

Best Arabidopsis Sequence Match ( AT1G05180.1 )
(BLAST)

001: MQAVKRSRRH VEEEPTMVEP KTKYDRQLRI WGEVGQAALE EASICLLNCG PTGSEALKNL VLGGVGSITV VDGSKVQFGD LGNNFMVDAK SVGQSKAKSV
101: CAFLQELNDS VNAKFIEENP DTLITTNPSF FSQFTLVIAT QLVEDSMLKL DRICRDANVK LVLVRSYGLA GFVRISVKEH PIIDSKPDHF LDDLRLNNPW
201: PELKSFVETI DLNVSEPAAA HKHIPYVVIL VKMAEEWAQS HSGNLPSTRE EKKEFKDLVK SKMVSTDEDN YKEAIEAAFK VFAPRGISSE VQKLINDSCA
301: EVNSNSSAFW VMVAALKEFV LNEGGGEAPL EGSIPDMTSS TEHYINLQKI YLAKAEADFL VIEERVKNIL KKIGRDPSSI PKPTIKSFCK NARKLKLCRY
401: RMVEDEFRNP SVTEIQKYLA DEDYSGAMGF YILLRAADRF AANYNKFPGQ FDGGMDEDIS RLKTTALSLL TDLGCNGSVL PDDLIHEMCR FGASEIHVVS
501: AFVGGIASQE VIKLVTKQFV PMLGTYIFNG IDHKSQLLKL

Arabidopsis Description

AXR1NEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WFT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.