Factsheet for HORVU5Hr1G081370.10

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU5Hr1G055840.2
HORVU6Hr1G003170.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05180.1	HORVU5Hr1G055840.2	AT4G36800.1	12682009
AT1G05180.1	HORVU6Hr1G003170.2	AT4G36800.1	12682009

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G105710.1	Barley	cytosol, nucleus	12.05	98.61
TraesCS5A01G318500.3	Wheat	cytosol	87.78	97.55
TraesCS5D01G324800.3	Wheat	mitochondrion	91.0	92.41
TraesCS5B01G319000.2	Wheat	golgi	87.95	90.56
KXG37258	Sorghum	cytosol	79.12	88.09
Zm00001d034640_P003	Maize	cytosol, extracellular	78.61	87.52
Os03t0820100-01	Rice	cytosol	78.44	87.01
Zm00001d012969_P008	Maize	cytosol	77.42	86.04
GSMUA_Achr5P02360_001	Banana	cytosol	64.35	71.78
VIT_12s0059g00610.t01	Wine grape	cytosol	61.97	69.79
KRH56132	Soybean	cytosol	59.93	67.5
CDY46837	Canola	nucleus	59.93	67.5
Bra015396.1-P	Field mustard	nucleus	56.88	67.13
CDY55450	Canola	cytosol	59.25	66.99
Bra032482.1-P	Field mustard	cytosol	54.16	66.74
KRH25373	Soybean	cytosol	59.25	66.73
CDY49510	Canola	cytosol	59.08	66.54
CDY06162	Canola	cytosol	58.23	66.47
CDY15536	Canola	cytosol	58.57	66.22
PGSC0003DMT400070486	Potato	cytosol	59.93	65.74
CDY48269	Canola	cytosol	58.06	65.14
Solyc12g005870.1.1	Tomato	cytosol	55.18	65.0
Solyc11g072460.1.1	Tomato	cytosol	59.25	64.99
Bra005592.1-P	Field mustard	cytosol	57.89	64.95
AT2G32410.1	Thale cress	nucleus	57.56	64.82
AT1G05180.1	Thale cress	cytosol	58.74	64.07
CDY12209	Canola	cytosol	58.06	64.04
CDY10045	Canola	cytosol	50.76	62.29
CDX98913	Canola	cytosol	10.53	59.62
CDY31150	Canola	cytosol	10.53	59.62
Bra020995.1-P	Field mustard	cytosol	11.21	55.46
AT3G25880.2	Thale cress	cytosol	6.96	55.41
CDY49508	Canola	cytosol	29.88	55.0
CDX81957	Canola	cytosol	10.19	53.1
CDX97381	Canola	extracellular	16.13	44.39
HORVU7Hr1G089410.1	Barley	cytosol, mitochondrion, nucleus	14.6	22.45
HORVU2Hr1G027820.1	Barley	cytosol	3.23	21.11
HORVU3Hr1G016090.4	Barley	peroxisome	8.83	20.55
HORVU3Hr1G016010.1	Barley	cytosol, plastid	14.77	18.67

Protein Annotations

MapMan:19.2.2.3.3.2	Gene3D:3.40.50.720	UniProt:A0A287S037	InterPro:APP-BP1	GO:GO:0003674	GO:GO:0003824
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0008641	GO:GO:0009987	GO:GO:0019538
GO:GO:0019781	GO:GO:0045116	EnsemblPlantsGene:HORVU5Hr1G081370	EnsemblPlants:HORVU5Hr1G081370.10	PFAM:PF00899	PIRSF:PIRSF039099
PANTHER:PTHR10953	PANTHER:PTHR10953:SF29	SUPFAM:SSF69572	InterPro:ThiF_NAD_FAD-bd	UniParc:UPI000B4803E1	InterPro:Ubiquitin-activating_enz
SEG:seg	:	:	:	:	:

Description

NEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A287S037]

Coordinates

chrchr5H:-:563933235..563940599

Molecular Weight (calculated)

65113.7 Da

IEP (calculated)

5.814

GRAVY (calculated)

-0.141

Length

589 amino acids

Sequence
(BLAST)

001: PAVPLELDAR TSWCETPAPT SAPHRACSFH AREGSRFPHL VFHFRLLGRS HRRETAASAA MAAAVAVAEP KTKYDRQLRI WGDQGQAALE KASICLLNCG
101: PTGTEALKNL VLGGIGSVTV VDGSKVEQSD LGNNFLLDEG CLGQSRAKSI CSFLQELNDA VKAKYVEESP ATMIDTNPSF FSQFTVIIAT QLPESSLLKL
201: DSICRSANIV LVAARSYGLT GLVRVSIKEH CVIESKPDHS LDDLRLHNPW TELKQFAKSI DICDKDPVVH KHTPYIVILV RLAEKWADAH DGQLPSTRQE
301: KREFKDLIRA HMLNVDEDNY KEAVESSYKV SVTPGISDEI RQIIDDSSSE VNFSSSDFWV LVASLKEFIA NEGNGELPLE GTIPDMTSLT EYYVSLQKIY
401: QAKAESDCLA MEYRVKSILK RIGRDPDSIS RACIKTFCKN TRKLKVCRYR SLEEEFSSPV LSEVQKYFAD EDSCFAMNFY VLLRAVDRLA ANYSRLPGQF
501: DSEIGEDVPR LKEAAVSVLS DMGLKGSSLS EDLIAEVCRF AGAEIHPVAA FIGGVASQEV IKLVTKQFVP LNGTFIFNGI DLKSQVLAL

Best Arabidopsis Sequence Match ( AT1G05180.1 )
(BLAST)

001: MQAVKRSRRH VEEEPTMVEP KTKYDRQLRI WGEVGQAALE EASICLLNCG PTGSEALKNL VLGGVGSITV VDGSKVQFGD LGNNFMVDAK SVGQSKAKSV
101: CAFLQELNDS VNAKFIEENP DTLITTNPSF FSQFTLVIAT QLVEDSMLKL DRICRDANVK LVLVRSYGLA GFVRISVKEH PIIDSKPDHF LDDLRLNNPW
201: PELKSFVETI DLNVSEPAAA HKHIPYVVIL VKMAEEWAQS HSGNLPSTRE EKKEFKDLVK SKMVSTDEDN YKEAIEAAFK VFAPRGISSE VQKLINDSCA
301: EVNSNSSAFW VMVAALKEFV LNEGGGEAPL EGSIPDMTSS TEHYINLQKI YLAKAEADFL VIEERVKNIL KKIGRDPSSI PKPTIKSFCK NARKLKLCRY
401: RMVEDEFRNP SVTEIQKYLA DEDYSGAMGF YILLRAADRF AANYNKFPGQ FDGGMDEDIS RLKTTALSLL TDLGCNGSVL PDDLIHEMCR FGASEIHVVS
501: AFVGGIASQE VIKLVTKQFV PMLGTYIFNG IDHKSQLLKL

Arabidopsis Description

AXR1NEDD8-activating enzyme E1 regulatory subunit [Source:UniProtKB/TrEMBL;Acc:A0A178WFT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.