Factsheet for HORVU3Hr1G016010.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G077710.3
HORVU7Hr1G036470.3
HORVU7Hr1G036500.7
HORVU7Hr1G036540.3
HORVU7Hr1G036570.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G50680.1	HORVU6Hr1G077710.3	AT4G25200.1	21798944
AT5G50680.1	HORVU7Hr1G036470.3	AT4G25200.1	21798944
AT5G50680.1	HORVU7Hr1G036500.7	AT4G25200.1	21798944
AT5G50680.1	HORVU7Hr1G036540.3	AT4G25200.1	21798944
AT5G50680.1	HORVU7Hr1G036570.2	AT4G25200.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G105300.2	Wheat	cytosol	66.95	93.98
TraesCS3A01G090000.1	Wheat	cytosol	66.74	93.67
TraesCS3D01G090000.1	Wheat	cytosol	65.88	92.47
HORVU2Hr1G027820.1	Barley	cytosol	16.31	84.44
Os11t0497000-01	Rice	cytosol	58.37	82.93
EES08513	Sorghum	cytosol	58.15	80.9
Zm00001d049163_P001	Maize	cytosol, extracellular	57.3	80.18
HORVU7Hr1G089410.1	Barley	cytosol, mitochondrion, nucleus	63.3	77.02
GSMUA_AchrUn_...	Banana	cytosol	45.49	65.63
HORVU3Hr1G016090.4	Barley	peroxisome	34.76	64.03
VIT_17s0000g01270.t01	Wine grape	cytosol	42.7	61.61
PGSC0003DMT400039493	Potato	cytosol	42.7	61.61
PGSC0003DMT400069346	Potato	cytosol	42.27	61.56
Solyc06g072080.2.1	Tomato	cytosol	41.63	61.01
KRH59806	Soybean	cytosol, nucleus	41.42	58.31
CDX92842	Canola	cytosol	40.13	58.07
CDX93356	Canola	cytosol	40.13	58.07
Solyc03g019730.2.1	Tomato	mitochondrion	42.92	57.8
AT4G24940.1	Thale cress	cytosol	39.91	57.76
CDY34327	Canola	cytosol	39.7	57.45
Bra013848.1-P	Field mustard	cytosol	39.7	57.45
AT5G50580.2	Thale cress	cytosol	39.27	57.19
AT5G50680.1	Thale cress	cytosol	39.27	57.19
KRH41120	Soybean	nucleus	34.33	56.94
CDY03404	Canola	cytosol	39.27	56.83
CDY08955	Canola	cytosol	12.66	55.66
CDY08954	Canola	cytosol, mitochondrion	19.74	52.57
Bra003552.1-P	Field mustard	cytosol	12.88	38.71
CDY48184	Canola	cytosol	12.88	37.74
CDY08961	Canola	plastid	11.37	37.59
CDY67953	Canola	cytosol	15.67	35.1
Bra023205.1-P	Field mustard	cytosol	15.67	33.95
HORVU3Hr1G105710.1	Barley	cytosol, nucleus	4.94	31.94
CDY68016	Canola	cytosol	13.09	27.73
CDY31910	Canola	nucleus	15.88	26.62
HORVU5Hr1G081370.10	Barley	cytosol, nucleus, plastid	18.67	14.77

Protein Annotations

EnsemblPlants:HORVU3Hr1G016010.1	EnsemblPlantsGene:HORVU3Hr1G016010	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0008641	GO:GO:0009987	GO:GO:0019538	InterPro:ThiF_NAD_FAD-bd
InterPro:UBQ/SUMO-activ_enz_E1-like	InterPro:Ubiquitin-activating_enz	PANTHER:PTHR10953	PANTHER:PTHR10953:SF162	PFAM:PF00899	PRINTS:PR01849
SEG:seg	SUPFAM:SSF69572	UniParc:UPI000B4742B0	UniProt:A0A287K888	MapMan:19.2.2.2.2.1	:

Description

No Description!

Coordinates

chrchr3H:+:38309028..38316575

Molecular Weight (calculated)

51898.7 Da

IEP (calculated)

8.376

GRAVY (calculated)

-0.262

Length

466 amino acids

Sequence
(BLAST)

001: MYLESPFGPL ICCRSSAKSV SRRKIYLFEA CFKKEDFLFL FLRGVSRRKM LAVLWQIHRP LINLAAHKPT TEPTAHRHTR FVPFPSPGTK PRSLRPPIPS
101: YLARRAGGDE RSRRQAGRQA AEPATRLRIQ VFRAMGGGGG TEEELTAQET ALYDRQIRVW GVDAQKRLSK AHVLVCGVNG TTIEFCKNIV LAGVGSLSLM
201: DDHIVTEDDL SANFLIPHDE SMHGGCSRAE ACCESLKDFN PMVRVAVAKG DPSVIDEGFI DSFDIIVVSC TSLKTKLFIN DNCRKRSKRI AFYSVECKDS
301: CGEIFVDLQN HSYLQKKPGG EPEQQELTYA SLQEAISVPW KNLPKKTTKL YYAMRVLESY ELSEGRNPGE TALSDLPAIL AWRKDMCDRM SLSESQIPTA
401: LLERLLAAGK KEHPPVCAIL GGILGQEVIK SISCKGDTIK SFFYFDTADG KGVMEDIPPT PVEQFA

Best Arabidopsis Sequence Match ( AT4G24940.1 )
(BLAST)

001: MDGEELTEQE TALYDRQIRV WGANAQRRLT KAHILVSGIK GTVAEFCKNI VLAGVGSVTL MDDRLANMEA LNANFLIPPD ENVYSGKTVA EICSDSLKDF
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS

Arabidopsis Description

SAE1ASUMO-activating enzyme subunit 1A [Source:UniProtKB/Swiss-Prot;Acc:Q8VY78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.