Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G090000.1 | Wheat | cytosol | 97.59 | 97.59 |
| TraesCS3A01G090000.1 | Wheat | cytosol | 97.29 | 97.29 |
| Os11t0497000-01 | Rice | cytosol | 83.13 | 84.15 |
| TraesCS7B01G275300.1 | Wheat | cytosol | 83.43 | 83.69 |
| EES08513 | Sorghum | cytosol | 81.33 | 80.6 |
| Zm00001d049163_P001 | Maize | cytosol, extracellular | 80.42 | 80.18 |
| HORVU2Hr1G027820.1 | Barley | cytosol | 21.69 | 80.0 |
| HORVU3Hr1G016010.1 | Barley | cytosol, plastid | 93.98 | 66.95 |
| GSMUA_AchrUn_... | Banana | cytosol | 63.55 | 65.33 |
| VIT_17s0000g01270.t01 | Wine grape | cytosol | 59.94 | 61.61 |
| PGSC0003DMT400039493 | Potato | cytosol | 59.64 | 61.3 |
| PGSC0003DMT400069346 | Potato | cytosol | 59.04 | 61.25 |
| Solyc06g072080.2.1 | Tomato | cytosol | 58.13 | 60.69 |
| HORVU3Hr1G016090.4 | Barley | peroxisome | 45.78 | 60.08 |
| CDX93356 | Canola | cytosol | 56.33 | 58.07 |
| CDX92842 | Canola | cytosol | 56.33 | 58.07 |
| KRH59806 | Soybean | cytosol, nucleus | 57.53 | 57.7 |
| Solyc03g019730.2.1 | Tomato | mitochondrion | 59.94 | 57.51 |
| Bra013848.1-P | Field mustard | cytosol | 55.72 | 57.45 |
| CDY34327 | Canola | cytosol | 55.72 | 57.45 |
| AT4G24940.1 | Thale cress | cytosol | 55.72 | 57.45 |
| KRH41120 | Soybean | nucleus | 48.19 | 56.94 |
| CDY03404 | Canola | cytosol | 55.12 | 56.83 |
| AT5G50580.2 | Thale cress | cytosol | 54.52 | 56.56 |
| AT5G50680.1 | Thale cress | cytosol | 54.52 | 56.56 |
| CDY08954 | Canola | cytosol, mitochondrion | 28.31 | 53.71 |
| CDY08955 | Canola | cytosol | 16.87 | 52.83 |
| Bra003552.1-P | Field mustard | cytosol | 19.28 | 41.29 |
| CDY48184 | Canola | cytosol | 19.28 | 40.25 |
| CDY08961 | Canola | plastid | 15.96 | 37.59 |
| CDY67953 | Canola | cytosol | 22.89 | 36.54 |
| Bra023205.1-P | Field mustard | cytosol | 22.89 | 35.35 |
| CDY31910 | Canola | nucleus | 23.8 | 28.42 |
| CDY68016 | Canola | cytosol | 18.37 | 27.73 |
| TraesCS5B01G489700.1 | Wheat | cytosol | 23.49 | 14.97 |
| TraesCS5B01G319000.2 | Wheat | golgi | 23.8 | 13.81 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G105300.2 | EnsemblPlantsGene:TraesCS3B01G105300 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008641 | GO:GO:0009987 | GO:GO:0019538 | InterPro:ThiF_NAD_FAD-bd |
| InterPro:UBQ/SUMO-activ_enz_E1-like | InterPro:Ubiquitin-activating_enz | PANTHER:PTHR10953 | PANTHER:PTHR10953:SF162 | PFAM:PF00899 | PRINTS:PR01849 |
| SEG:seg | SUPFAM:SSF69572 | MapMan:19.2.2.2.2.1 | : | : | : |
Description
No Description!
Coordinates
chr3B:+:71398422..71406082
Molecular Weight (calculated)
36485.8 Da
IEP (calculated)
4.853
GRAVY (calculated)
-0.162
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGGGTEEE LTAQETALYD RQIRVWGVDA QKRLSKAHVL VCGVNGTTIE FCKNIVLAGV GSLSLMDDHI VTEDDLSANF LIPHDICMHG VSSRAEACCE
101: SLKDFNPMVR VAVAIGDPSL IDEGFVDRFD IIVVSCASLK TKLFINDNCR KRSKHIAFYS VECKDSCGEI FVDLQNHSYL QKKPGGEPEQ QELSYASLQE
201: AISVPWKNLP KKTTKLYYAM RVLESYELSE GREPGETTLS DLPAVLAQRK DMCDRMSLSE SQIPTALLER LLAAGKKEHP PVCAILGGIL GQEVIKSISC
301: KGDPIKNFFY YDAADGKGIM EDIPPTPVEQ FA
101: SLKDFNPMVR VAVAIGDPSL IDEGFVDRFD IIVVSCASLK TKLFINDNCR KRSKHIAFYS VECKDSCGEI FVDLQNHSYL QKKPGGEPEQ QELSYASLQE
201: AISVPWKNLP KKTTKLYYAM RVLESYELSE GREPGETTLS DLPAVLAQRK DMCDRMSLSE SQIPTALLER LLAAGKKEHP PVCAILGGIL GQEVIKSISC
301: KGDPIKNFFY YDAADGKGIM EDIPPTPVEQ FA
001: MDGEELTEQE TALYDRQIRV WGANAQRRLT KAHILVSGIK GTVAEFCKNI VLAGVGSVTL MDDRLANMEA LNANFLIPPD ENVYSGKTVA EICSDSLKDF
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS
101: NPMVRVSVEK GDLSMLGTDF FEQFDVVVIG YGSRATKKYV NEKCRKLKKR VAFYTVDCRD SCGEIFVDLQ DYKYTKKKLE EMVECELNFP SFQEAISVPW
201: KPIPRRTAKL YFAMRVIEVF EESEGRKHGE CSLLDLARVL EIKKQLCEAN SVSESHIPDI LLERLITGTT EFPPVCAIVG GILAQEVIKA VSGKGDPLKN
301: FFYYDGEDGK GVMEDISDSF TS
Arabidopsis Description
SAE1ASUMO-activating enzyme subunit 1A [Source:UniProtKB/Swiss-Prot;Acc:Q8VY78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.