Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400012249 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G50680.1 | PGSC0003DMT400012249 | AT4G25200.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g019730.2.1 | Tomato | mitochondrion | 96.9 | 90.46 |
| PGSC0003DMT400069346 | Potato | cytosol | 81.42 | 82.19 |
| VIT_17s0000g01270.t01 | Wine grape | cytosol | 73.06 | 73.06 |
| KRH41120 | Soybean | nucleus | 62.85 | 72.24 |
| KRH59806 | Soybean | cytosol, nucleus | 72.14 | 70.39 |
| GSMUA_AchrUn_... | Banana | cytosol | 69.04 | 69.04 |
| Bra013848.1-P | Field mustard | cytosol | 68.73 | 68.94 |
| CDX92842 | Canola | cytosol | 68.73 | 68.94 |
| CDX93356 | Canola | cytosol | 68.73 | 68.94 |
| CDY03404 | Canola | cytosol | 68.73 | 68.94 |
| CDY34327 | Canola | cytosol | 68.73 | 68.94 |
| AT5G50580.2 | Thale cress | cytosol | 67.8 | 68.44 |
| AT5G50680.1 | Thale cress | cytosol | 67.8 | 68.44 |
| AT4G24940.1 | Thale cress | cytosol | 67.49 | 67.7 |
| CDY08955 | Canola | cytosol | 20.74 | 63.21 |
| CDY08954 | Canola | cytosol, mitochondrion | 34.06 | 62.86 |
| TraesCS7A01G352700.2 | Wheat | cytosol | 62.23 | 61.09 |
| Os11t0497000-01 | Rice | cytosol | 61.3 | 60.37 |
| TraesCS7D01G370300.1 | Wheat | cytosol | 61.92 | 60.24 |
| TraesCS3A01G090000.1 | Wheat | cytosol | 61.61 | 59.94 |
| TraesCS3D01G090000.1 | Wheat | cytosol | 61.3 | 59.64 |
| TraesCS3B01G105300.2 | Wheat | cytosol | 61.3 | 59.64 |
| EES08513 | Sorghum | cytosol | 61.3 | 59.1 |
| Zm00001d049163_P001 | Maize | cytosol, extracellular | 59.75 | 57.96 |
| TraesCS7B01G275300.1 | Wheat | cytosol | 57.59 | 56.19 |
| HORVU7Hr1G089410.1 | Barley | cytosol, mitochondrion, nucleus | 61.61 | 51.96 |
| HORVU2Hr1G027820.1 | Barley | cytosol | 13.93 | 50.0 |
| CDY08961 | Canola | plastid | 20.12 | 46.1 |
| HORVU3Hr1G016010.1 | Barley | cytosol, plastid | 61.61 | 42.7 |
| HORVU3Hr1G016090.4 | Barley | peroxisome | 32.51 | 41.5 |
| PGSC0003DMT400070486 | Potato | cytosol | 23.22 | 13.97 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400039493 | EnsemblPlantsGene:PGSC0003DMG400015268 | EntrezGene:102600049 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008641 | InterPro:ThiF_NAD_FAD-bd | InterPro:Ubiquitin-activating_enz | PANTHER:PTHR10953 | PANTHER:PTHR10953:SF162 | PFAM:PF00899 |
| PGSC:PGSC0003DMG400015268 | RefSeq:XP_006351517.1 | SEG:seg | SUPFAM:SSF69572 | UniParc:UPI000296DF2A | UniProt:M1B8C9 |
| MapMan:19.2.2.2.2.1 | : | : | : | : | : |
Description
Ubiquitin activating enzyme [Source:PGSC_GENE;Acc:PGSC0003DMG400015268]
Coordinates
chr3:+:50336856..50343765
Molecular Weight (calculated)
36277.5 Da
IEP (calculated)
4.954
GRAVY (calculated)
-0.193
Length
323 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTEGEQLTE QETAIYDRQI RVWGVDAQRR LSKSNVFVSG LKGTSVEFCK NIVLAGVGSL TLNDDRLVTE DLLFANFLTP PDENDFRGKS VAELCCDSLK
101: DFNPMVSVSV EKGALSIFDA DFFQKFDVVV VNCCSLLTKK SVNAKCRKLP KRVAFYSVEC RDSCGEIFVD LQNFSYCKKK NEETIECKLH YPSFEEAIAV
201: PWRSLPKRMS KLYYAMRVIE RFEELEGRNP GETSVDDLPN VQKLRKELCE AYCLNESHIP DSLLRRLMAS TSEFPPVCAI VGGILGQEVI KAISGKGDPL
301: KNFFFFDAMD GKGIIEDISN VNS
101: DFNPMVSVSV EKGALSIFDA DFFQKFDVVV VNCCSLLTKK SVNAKCRKLP KRVAFYSVEC RDSCGEIFVD LQNFSYCKKK NEETIECKLH YPSFEEAIAV
201: PWRSLPKRMS KLYYAMRVIE RFEELEGRNP GETSVDDLPN VQKLRKELCE AYCLNESHIP DSLLRRLMAS TSEFPPVCAI VGGILGQEVI KAISGKGDPL
301: KNFFFFDAMD GKGIIEDISN VNS
001: MDGDELTEQE TALYDRQIRV WGAGAQRRLS KSHVLVSGIK GTVAEFCKNI VLAGVGSVTL LDDRLVTTEV FNANFLILPD ENAYVGKTVA EICCDSLKDF
101: NPMVHVSIEK GDLSTLGVDF FEKFDVVVIG YSSRATKKAV NEKCRNLAKD VAFYTVDCRG SCGEIFVDLQ NYKYTKKKLD ETVECELTFP SFEEAVSVPW
201: KPMPRRTAKL YFAMRVIELF EETEGRKPGE CSLSDLPRVL KLKKELCEGN SVSENHIPDI LLERLVSNNT EFPPACAIIG GILGQEVIKV ISGKGEPLKN
301: FFYFDAEDGK GVIEDLSHKL
101: NPMVHVSIEK GDLSTLGVDF FEKFDVVVIG YSSRATKKAV NEKCRNLAKD VAFYTVDCRG SCGEIFVDLQ NYKYTKKKLD ETVECELTFP SFEEAVSVPW
201: KPMPRRTAKL YFAMRVIELF EETEGRKPGE CSLSDLPRVL KLKKELCEGN SVSENHIPDI LLERLVSNNT EFPPACAIIG GILGQEVIKV ISGKGEPLKN
301: FFYFDAEDGK GVIEDLSHKL
Arabidopsis Description
SAE1B-2SUMO-activating enzyme subunit 1B-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DI12]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.