Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 7
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400003274 | |
| PGSC0003DMT400004311 | |
| PGSC0003DMT400004315 | |
| PGSC0003DMT400004637 | |
| PGSC0003DMT400008757 | |
| PGSC0003DMT400008759 | |
| PGSC0003DMT400008760 | |
| PGSC0003DMT400010993 | |
| PGSC0003DMT400012249 | |
| PGSC0003DMT400014926 | |
| PGSC0003DMT400015293 | |
| PGSC0003DMT400015298 | |
| PGSC0003DMT400025067 | |
| PGSC0003DMT400025074 | |
| PGSC0003DMT400025087 | |
| PGSC0003DMT400031843 | |
| PGSC0003DMT400035019 | |
| PGSC0003DMT400035020 | |
| PGSC0003DMT400038705 | |
| PGSC0003DMT400052971 | |
| PGSC0003DMT400052977 | |
| PGSC0003DMT400053182 | |
| PGSC0003DMT400053185 | |
| PGSC0003DMT400053556 | |
| PGSC0003DMT400055931 | |
| PGSC0003DMT400056663 | |
| PGSC0003DMT400056665 | |
| PGSC0003DMT400059103 | |
| PGSC0003DMT400062463 | |
| PGSC0003DMT400062849 | |
| PGSC0003DMT400069831 | |
| PGSC0003DMT400070782 | |
| PGSC0003DMT400072788 | |
| PGSC0003DMT400073689 | |
| PGSC0003DMT400078006 | |
| PGSC0003DMT400078007 | |
| PGSC0003DMT400078008 | |
| PGSC0003DMT400078201 | |
| PGSC0003DMT400078202 | |
| PGSC0003DMT400078237 | |
| PGSC0003DMT400078676 | |
| PGSC0003DMT400083778 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G25200.1 | PGSC0003DMT400004311 | AT1G06270.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400004315 | AT1G06270.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400008757 | AT1G12620.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400008759 | AT1G12620.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400008760 | AT1G12620.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400015293 | AT1G12620.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400015298 | AT1G12620.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400025067 | AT1G12620.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400025074 | AT1G12620.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400025087 | AT1G12620.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400052971 | AT1G12620.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400052977 | AT1G12620.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400053182 | AT1G12620.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400053185 | AT1G12620.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400053556 | AT1G12620.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400056663 | AT1G12620.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400056665 | AT1G12620.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400062849 | AT1G19010.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400072788 | AT1G26460.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400073689 | AT1G52560.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400014926 | AT1G63470.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400031843 | AT1G63470.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400035019 | AT2G34340.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400035020 | AT2G34340.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400003274 | AT2G47450.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400069831 | AT3G54826.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400062463 | AT3G56290.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400055931 | AT4G05180.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400012249 | AT4G25200.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400010993 | AT4G32190.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400078676 | AT4G37890.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400059103 | AT5G05190.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400070782 | AT5G09320.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400004637 | AT5G10710.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400012249 | AT5G51440.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400078237 | AT5G58575.1 | 21798944 |
| AT4G25200.1 | PGSC0003DMT400083778 | AT5G64350.1 | 21798944 |
| AT5G51440.1 | PGSC0003DMT400038705 | AT1G07400.1 | 21798944 |
| AT5G51440.1 | PGSC0003DMT400078006 | AT1G07400.1 | 21798944 |
| AT5G51440.1 | PGSC0003DMT400078007 | AT1G07400.1 | 21798944 |
| AT5G51440.1 | PGSC0003DMT400078008 | AT1G07400.1 | 21798944 |
| AT5G51440.1 | PGSC0003DMT400078201 | AT1G07400.1 | 21798944 |
| AT5G51440.1 | PGSC0003DMT400078202 | AT1G07400.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g078700.2.1 | Tomato | plastid | 98.1 | 98.57 |
| VIT_02s0154g00480.t01 | Wine grape | mitochondrion, plastid | 60.66 | 63.68 |
| VIT_02s0154g00490.t01 | Wine grape | mitochondrion | 54.98 | 57.71 |
| KRH23958 | Soybean | mitochondrion | 54.98 | 54.72 |
| Bra013872.1-P | Field mustard | mitochondrion | 54.5 | 53.99 |
| CDX89437 | Canola | mitochondrion | 54.03 | 53.52 |
| CDY03368 | Canola | mitochondrion | 54.03 | 53.52 |
| TraesCS7D01G178900.1 | Wheat | cytosol | 30.81 | 53.28 |
| AT4G25200.1 | Thale cress | mitochondrion | 52.13 | 52.38 |
| CDY38862 | Canola | mitochondrion | 47.39 | 51.02 |
| Bra029174.1-P | Field mustard | mitochondrion | 47.39 | 50.76 |
| GSMUA_Achr10P... | Banana | mitochondrion | 50.71 | 49.54 |
| CDY32630 | Canola | mitochondrion | 38.39 | 47.65 |
| KRH39841 | Soybean | mitochondrion | 33.18 | 47.62 |
| AT5G51440.1 | Thale cress | mitochondrion | 47.39 | 47.62 |
| TraesCS7B01G083300.1 | Wheat | cytosol | 28.44 | 45.11 |
| OQU85385 | Sorghum | mitochondrion | 46.45 | 44.34 |
| Zm00001d052194_P001 | Maize | mitochondrion | 44.55 | 43.12 |
| TraesCS6B01G346700.1 | Wheat | mitochondrion | 43.6 | 42.79 |
| TraesCS6A01G316200.1 | Wheat | mitochondrion | 43.6 | 42.79 |
| CDX99920 | Canola | mitochondrion | 32.23 | 42.5 |
| Os02t0758000-01 | Rice | plastid | 44.08 | 42.27 |
| CDY00476 | Canola | mitochondrion | 32.23 | 42.24 |
| TraesCS6D01G295500.1 | Wheat | mitochondrion | 43.13 | 42.13 |
| TraesCS7A01G232500.1 | Wheat | plastid | 40.76 | 41.75 |
| Bra028253.1-P | Field mustard | mitochondrion | 31.28 | 40.99 |
| TraesCS7D01G179400.1 | Wheat | plastid | 40.76 | 40.95 |
| TraesCS7B01G083100.1 | Wheat | plastid | 41.23 | 40.85 |
| HORVU7Hr1G036500.7 | Barley | plastid | 39.34 | 40.69 |
| TraesCS7D01G232600.1 | Wheat | plastid | 39.81 | 40.19 |
| TraesCS7D01G179300.1 | Wheat | plastid | 40.28 | 40.09 |
| TraesCS7A01G236700.1 | Wheat | plastid | 40.28 | 40.09 |
| TraesCS7B01G082900.1 | Wheat | plastid | 37.91 | 40.0 |
| TraesCS7D01G179200.1 | Wheat | cytosol, plastid | 39.34 | 39.71 |
| TraesCS7D01G179500.1 | Wheat | plastid | 40.28 | 39.53 |
| TraesCS7D01G179100.1 | Wheat | plastid | 40.28 | 39.53 |
| TraesCS7B01G083500.1 | Wheat | mitochondrion | 43.6 | 39.48 |
| TraesCS7D01G179000.1 | Wheat | plastid | 39.81 | 39.44 |
| TraesCS7A01G177500.1 | Wheat | cytosol, plastid | 40.28 | 39.35 |
| TraesCS7A01G177700.1 | Wheat | cytosol, plastid | 40.28 | 39.35 |
| TraesCS7B01G083400.1 | Wheat | plastid | 39.34 | 38.97 |
| TraesCS7B01G083200.2 | Wheat | plastid | 40.28 | 38.46 |
| TraesCS7A01G177600.1 | Wheat | plastid | 38.86 | 38.14 |
| TraesCS7D01G179600.1 | Wheat | mitochondrion | 42.18 | 38.03 |
| Zm00001d044874_P001 | Maize | cytosol, plastid | 35.55 | 36.06 |
| HORVU7Hr1G036570.2 | Barley | cytosol | 37.44 | 35.75 |
| HORVU7Hr1G036470.3 | Barley | cytosol, nucleus | 40.76 | 35.54 |
| TraesCS2B01G531300.1 | Wheat | plastid | 29.38 | 35.23 |
| TraesCS7B01G130900.1 | Wheat | plastid | 27.01 | 35.19 |
| OQU75612 | Sorghum | plastid | 35.55 | 33.63 |
| OQU75930 | Sorghum | plastid | 35.55 | 33.63 |
| OQU76071 | Sorghum | plastid | 31.28 | 32.67 |
| HORVU7Hr1G036540.3 | Barley | mitochondrion, nucleus, plastid | 39.81 | 32.56 |
| TraesCS7A01G177800.1 | Wheat | nucleus | 33.18 | 30.43 |
| EER89431 | Sorghum | plastid | 31.28 | 30.41 |
| EER89430 | Sorghum | plastid | 32.7 | 30.4 |
| PGSC0003DMT400012247 | Potato | mitochondrion | 26.54 | 28.72 |
| KXG19616 | Sorghum | plastid | 36.49 | 28.62 |
| HORVU6Hr1G077710.3 | Barley | cytosol | 36.02 | 27.84 |
| TraesCS5B01G123900.1 | Wheat | plastid | 27.96 | 24.69 |
| PGSC0003DMT400012246 | Potato | plastid | 19.43 | 24.12 |
| Os06t0219500-00 | Rice | mitochondrion | 34.12 | 23.3 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400012249 | EnsemblPlantsGene:PGSC0003DMG400004808 | EntrezGene:102598867 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | InterPro:HSP20 |
| InterPro:HSP20-like_chaperone | InterPro:IPR002068 | InterPro:IPR008978 | PANTHER:PTHR11527 | PANTHER:PTHR11527:SF136 | PFAM:PF00011 |
| PFscan:PS01031 | PGSC:PGSC0003DMG400004808 | RefSeq:XP_006355458.1 | SEG:seg | SUPFAM:SSF49764 | UniParc:UPI000294F817 |
| UniProt:M1A0Z7 | MapMan:19.1.8.8 | : | : | : | : |
Description
Mitochondrial small heat shock protein [Source:PGSC_GENE;Acc:PGSC0003DMG400004808]
Coordinates
chr8:+:52375001..52376265
Molecular Weight (calculated)
23913.4 Da
IEP (calculated)
7.000
GRAVY (calculated)
-0.608
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSLALRRA TASSLFNRLV NPVRSASAFR SFNTNTQMAA YDQDDRGVDV DRRSDRSVSR RDAFPSLFSD VFDPFSTPIR SVSQLLNMMD QMMDSPFVAA
101: PRAMGAGVGA RRGWDVKEDD NALYIKMDMP GLDKENVKVA VEENTLIIKG EGEKESENEE YRRRYSTRLE IPQNMYKLDG IKAEMKNGVL KVAVPKVKQE
201: ERKDVFDVKI E
101: PRAMGAGVGA RRGWDVKEDD NALYIKMDMP GLDKENVKVA VEENTLIIKG EGEKESENEE YRRRYSTRLE IPQNMYKLDG IKAEMKNGVL KVAVPKVKQE
201: ERKDVFDVKI E
001: MASALALKRL LSSSIAPRSR SVLRPAVSSR LFNTNAVRSY DDDGENGDGV DLYRRSVPRR RGDFFSDVFD PFSPTRSVSQ VLNLMDQFME NPLLSATRGM
101: GASGARRGWD IKEKDDALYL RIDMPGLSRE DVKLALEQDT LVIRGEGKNE EDGGEEGESG NRRFTSRIGL PDKIYKIDEI KAEMKNGVLK VVIPKMKEQE
201: RNDVRQIEIN
101: GASGARRGWD IKEKDDALYL RIDMPGLSRE DVKLALEQDT LVIRGEGKNE EDGGEEGESG NRRFTSRIGL PDKIYKIDEI KAEMKNGVLK VVIPKMKEQE
201: RNDVRQIEIN
Arabidopsis Description
HSP23.6HSP23.6-MITO [Source:UniProtKB/TrEMBL;Acc:A0A178USN5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.