CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029174.1-P	Field mustard	mitochondrion	98.98	98.48
CDY32630	Canola	mitochondrion	75.51	87.06
AT5G51440.1	Thale cress	mitochondrion	75.51	70.48
CDX89437	Canola	mitochondrion	68.88	63.38
CDY03368	Canola	mitochondrion	68.37	62.91
CDX99920	Canola	mitochondrion	50.51	61.88
CDY00476	Canola	mitochondrion	46.43	56.52
VIT_16s0022g00510.t01	Wine grape	mitochondrion	58.16	54.81
KRH23958	Soybean	mitochondrion	56.12	51.89
Solyc08g078700.2.1	Tomato	plastid	51.02	47.62
PGSC0003DMT400012249	Potato	mitochondrion	51.02	47.39
KRH39841	Soybean	mitochondrion	34.69	46.26
GSMUA_Achr10P...	Banana	mitochondrion	47.96	43.52
TraesCS7D01G178900.1	Wheat	cytosol	25.51	40.98
TraesCS7B01G083300.1	Wheat	cytosol	26.02	38.35
TraesCS6A01G316200.1	Wheat	mitochondrion	41.33	37.67
Os02t0758000-01	Rice	plastid	41.84	37.27
TraesCS6B01G346700.1	Wheat	mitochondrion	40.82	37.21
TraesCS6D01G295500.1	Wheat	mitochondrion	40.82	37.04
OQU85385	Sorghum	mitochondrion	41.33	36.65
Zm00001d052194_P001	Maize	mitochondrion	40.31	36.24
TraesCS7A01G236700.1	Wheat	plastid	37.24	34.43
TraesCS7D01G179200.1	Wheat	cytosol, plastid	36.22	33.97
TraesCS7D01G179500.1	Wheat	plastid	37.24	33.95
TraesCS7A01G177600.1	Wheat	plastid	36.22	33.02
TraesCS7D01G179300.1	Wheat	plastid	35.71	33.02
TraesCS7A01G177700.1	Wheat	cytosol, plastid	36.22	32.87
TraesCS7A01G177500.1	Wheat	cytosol, plastid	36.22	32.87
HORVU7Hr1G036500.7	Barley	plastid	34.18	32.84
TraesCS7B01G083100.1	Wheat	plastid	35.2	32.39
TraesCS7B01G083200.2	Wheat	plastid	36.22	32.13
TraesCS7D01G179100.1	Wheat	plastid	35.2	32.09
TraesCS7D01G232600.1	Wheat	plastid	34.18	32.06
TraesCS7B01G082900.1	Wheat	plastid	32.65	32.0
TraesCS7D01G179000.1	Wheat	plastid	34.69	31.92
TraesCS7B01G083400.1	Wheat	plastid	34.69	31.92
TraesCS7D01G179400.1	Wheat	plastid	34.18	31.9
TraesCS2B01G531300.1	Wheat	plastid	28.57	31.82
OQU76071	Sorghum	plastid	32.65	31.68
HORVU7Hr1G036570.2	Barley	cytosol	35.71	31.67
TraesCS7A01G232500.1	Wheat	plastid	32.65	31.07
TraesCS7B01G083500.1	Wheat	mitochondrion	35.71	30.04
TraesCS7D01G179600.1	Wheat	mitochondrion	35.2	29.49
OQU75612	Sorghum	plastid	33.16	29.15
OQU75930	Sorghum	plastid	33.16	29.15
Zm00001d044874_P001	Maize	cytosol, plastid	30.1	28.37
HORVU7Hr1G036470.3	Barley	cytosol, nucleus	34.18	27.69
HORVU7Hr1G036540.3	Barley	mitochondrion, nucleus, plastid	36.22	27.52
TraesCS7B01G130900.1	Wheat	plastid	21.94	26.54
TraesCS7A01G177800.1	Wheat	nucleus	30.61	26.09
EER89430	Sorghum	plastid	30.1	25.99
EER89431	Sorghum	plastid	28.06	25.35
HORVU6Hr1G077710.3	Barley	cytosol	34.69	24.91
KXG19616	Sorghum	plastid	34.18	24.91
Os06t0219500-00	Rice	mitochondrion	33.67	21.36
TraesCS5B01G123900.1	Wheat	plastid	22.96	18.83

Protein Annotations

EnsemblPlants:CDY38862	EnsemblPlantsGene:GSBRNA2T00066703001	Gene3D:2.60.40.790	InterPro:A-crystallin/Hsp20_dom	InterPro:HSP20	InterPro:HSP20-like_chaperone
InterPro:IPR002068	InterPro:IPR008978	PANTHER:PTHR11527	PANTHER:PTHR11527:SF238	PFAM:PF00011	PFscan:PS01031
ProteinID:CDY38862	ProteinID:CDY38862.1	SEG:seg	SUPFAM:SSF49764	UniParc:UPI0004EE66D2	UniProt:A0A078HLT8
MapMan:19.1.8.8	:	:	:	:	:

Description

BnaA03g13170DBnaA03g13170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLT8]

Coordinates

chrLK032434:+:92009..92750

Molecular Weight (calculated)

21905.0 Da

IEP (calculated)

7.783

GRAVY (calculated)

-0.686

Length

196 amino acids

Sequence
(BLAST)

001: MASSTSLALR RLISSSVVPR SVRPAASLRL FNTNAARSYE EGDDRNHRPN RTVSPRGGDF FSDMFDPFTP TRSLSQVLNF MDQIGESPLA SSMRGGMGAR
101: GWDVKEKDDG LHLRIDMPGL SREDVKLSLE QNTLVIKGEG GEEEEDGRKF SSRIGLPEKV YKTDEIKAEM KNGVLKVVVP KLKEDERNNV RHIQVD

Best Arabidopsis Sequence Match ( AT5G51440.1 )
(BLAST)

001: MASSSALALR RLLSSSTVAV PRALRAVRPV AASSRLFNTN AARNYEDGVD RNHHSNRHVS RHGGDFFSHI LDPFTPTRSL SQMLNFMDQV SEIPLVSATR
101: GMGASGVRRG WNVKEKDDAL HLRIDMPGLS REDVKLALEQ NTLVIRGEGE TEEGEDVSGD GRRFTSRIEL PEKVYKTDEI KAEMKNGVLK VVIPKIKEDE
201: RNNIRHINVD

Arabidopsis Description

HSP23.523.5 kDa heat shock protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGM9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.