Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
- plastid 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g022030.2.1 | Tomato | nucleus | 92.86 | 92.86 |
| VIT_04s0008g05610.t01 | Wine grape | plastid | 55.58 | 55.3 |
| CDX81488 | Canola | cytosol, nucleus, plastid | 10.91 | 54.9 |
| KRH15859 | Soybean | endoplasmic reticulum, vacuole | 47.01 | 50.42 |
| KRH05183 | Soybean | plastid | 49.35 | 49.74 |
| CDX68825 | Canola | plastid | 44.42 | 45.42 |
| Bra011328.1-P | Field mustard | plastid | 44.03 | 45.02 |
| CDX75227 | Canola | plastid | 44.03 | 45.02 |
| AT4G32190.1 | Thale cress | plastid | 44.55 | 43.81 |
| CDX81489 | Canola | nucleus | 8.96 | 43.67 |
| CDX81487 | Canola | cytosol | 11.56 | 39.91 |
| CDY61791 | Canola | nucleus | 7.79 | 38.71 |
| CDY61790 | Canola | endoplasmic reticulum, extracellular | 18.57 | 37.83 |
| TraesCS6D01G164600.1 | Wheat | plastid | 32.34 | 32.21 |
| Zm00001d053726_P001 | Maize | plastid | 32.21 | 32.17 |
| TraesCS6A01G180500.1 | Wheat | plastid | 32.21 | 32.08 |
| EES06399 | Sorghum | plastid | 32.21 | 32.04 |
| Os02t0186400-01 | Rice | plastid | 31.69 | 31.98 |
| HORVU6Hr1G036020.1 | Barley | plastid | 32.08 | 31.91 |
| CDY02356 | Canola | cytosol | 6.36 | 29.7 |
| Bra023156.1-P | Field mustard | cytosol | 6.36 | 29.7 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 6.49 | 22.03 |
| CDY35289 | Canola | nucleus | 6.36 | 13.1 |
| Bra030239.1-P | Field mustard | nucleus | 8.83 | 12.62 |
| CDX95298 | Canola | nucleus | 8.44 | 6.54 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400010993 | EnsemblPlantsGene:PGSC0003DMG400004306 | EntrezGene:102605835 | ncoils:Coil | PANTHER:PTHR23160 | PANTHER:PTHR23160:SF11 |
| PGSC:PGSC0003DMG400004306 | RefSeq:XP_006344374.1 | SEG:seg | UniParc:UPI000294CC99 | UniProt:M0ZYW5 | MapMan:3.2.1.3 |
Description
Ubiquitin-protein ligase BRE1A [Source:PGSC_GENE;Acc:PGSC0003DMG400004306]
Coordinates
chr8:-:22239060..22243387
Molecular Weight (calculated)
88400.2 Da
IEP (calculated)
4.561
GRAVY (calculated)
-0.673
Length
770 amino acids
Sequence
(BLAST)
(BLAST)
001: MALPALPRAT LSFSSLCQPT EFCFMRLEWK KRLVLMTAHH GRGPSSRIVR SVLDNRKSNI TGDEATEPAR VLLERLFAQT QKLEQQIGRN IYFPQVAELG
101: LNLGKLESDL QDALAALKKK EEDIQDTERK VLMEYNELNR AKIELEQRVE EMAAANSRQE KLENELRQAN LILVSQAAEI EDLKFRFNEI DQEISAAQTA
201: LVSKEDEINK MMIELKNKSD EVANTESQLR TKGELLDTAN EVVQRQEVEL QNLQREIQEK EKELQVFLTM QKTEEEKLKV SKSNLEKQAM DWLIAKQEMK
301: KLEVETSNYG GEANRSLEDF RRVKKLLADV RSELVSSQRA LTSSRKKMEE QENLLEDRLE ELEEQRRSVM SYMTSLKEAQ NEVENEKVQL TVAEARNKEL
401: ERDLSIEKEL VEELQTENNI KKSSLHVAIN EKSALQEELD CKSAEFGETQ NLLQVKESEL VDARLEIQHL KSQCASLQLM LEEKDKELLD SRKTVDELNQ
501: EIAELRVNMN SQEQQLIQAT SMLKEKEESM QIMQLELNDT KMKYSEAETV VEHMVDLTNK LVISVKDDVL SPLSHTDEMW SSQLVEKPTD AFRWHKNQLE
601: NELELTRESL RSREMDSLAA QRALKLKEQE LKIVRQKLND REEEINKMKN MTRDADGPRQ SYVLAQERTG EKSTGDLAVE KLQFEGAQLE VEAATTALQK
701: LAELSRDLLN KASLTIEADY DSSLLLVDIP ETAANVSSSF ECLAEVYSEM AQLSALSEKL VKEAGILCPQ
101: LNLGKLESDL QDALAALKKK EEDIQDTERK VLMEYNELNR AKIELEQRVE EMAAANSRQE KLENELRQAN LILVSQAAEI EDLKFRFNEI DQEISAAQTA
201: LVSKEDEINK MMIELKNKSD EVANTESQLR TKGELLDTAN EVVQRQEVEL QNLQREIQEK EKELQVFLTM QKTEEEKLKV SKSNLEKQAM DWLIAKQEMK
301: KLEVETSNYG GEANRSLEDF RRVKKLLADV RSELVSSQRA LTSSRKKMEE QENLLEDRLE ELEEQRRSVM SYMTSLKEAQ NEVENEKVQL TVAEARNKEL
401: ERDLSIEKEL VEELQTENNI KKSSLHVAIN EKSALQEELD CKSAEFGETQ NLLQVKESEL VDARLEIQHL KSQCASLQLM LEEKDKELLD SRKTVDELNQ
501: EIAELRVNMN SQEQQLIQAT SMLKEKEESM QIMQLELNDT KMKYSEAETV VEHMVDLTNK LVISVKDDVL SPLSHTDEMW SSQLVEKPTD AFRWHKNQLE
601: NELELTRESL RSREMDSLAA QRALKLKEQE LKIVRQKLND REEEINKMKN MTRDADGPRQ SYVLAQERTG EKSTGDLAVE KLQFEGAQLE VEAATTALQK
701: LAELSRDLLN KASLTIEADY DSSLLLVDIP ETAANVSSSF ECLAEVYSEM AQLSALSEKL VKEAGILCPQ
001: MGFSQAIRLN LASFSSPSPC DYCLTRVVNH KQKSLVAFPS ITRRKRHLLL SVQSVLHNTR PNINDNGSAE SANVLFDKLF ARTHRLERQT NQHSVYPDDD
101: DLPYSNLGVL ESDLEAALVA LLKREEDLHD AERKLLSDKN KLNRAKEELE KREKTISEAS LKHESLQEEL KRANVELASQ AREIEELKHK LRERDEERAA
201: LQSSLTLKEE ELEKMRQEIA NRSKEVSMAI SEFESKSQLL SKANEVVKRQ EGEIYALQRA LEEKEEELEI SKATKKLEQE KLRETEANLK KQTEEWLIAQ
301: DEVNKLKEET VKRLGEANET MEDFMKVKKL LTDVRFELIS SREALVFSRE QMEEKELLLE KQLEELEEQR KSVLSYMQSL RDAHTEVESE RVKLRVVEAK
401: NFALEREISV QKELLEDLRE ELQKEKPLLE LAMHDISVIQ DELYKKANAF QVSQNLLQEK ESSLVEAKLE IQHLKSEQAS LELLLQEKDE ELAEARNKLG
501: EVNQEVTELK ALMISREDQL MEATEMLKEK DVHLHRIEGE LGSSKLKVTE AEMVVERIAE LTNRLLMSTT NGQNQNAMRI NNEISIDSMQ QPLEKPHDDY
601: GMENKRLVME LSFTRENLRM KEMEVLAVQR ALTFKDEEIN VVMGRLEAKE QELKKLKEET INDSEDLKVL YALAQERVGE KTMGDLAIEM LQLEAANLEV
701: EAATSALQKL AKMSTELLTQ ADMSIEADTT HTVMPERGYS EGSNECLGEV KTEVVRLWSL TEKLLENAGI VAGTSTCMEG VIL
101: DLPYSNLGVL ESDLEAALVA LLKREEDLHD AERKLLSDKN KLNRAKEELE KREKTISEAS LKHESLQEEL KRANVELASQ AREIEELKHK LRERDEERAA
201: LQSSLTLKEE ELEKMRQEIA NRSKEVSMAI SEFESKSQLL SKANEVVKRQ EGEIYALQRA LEEKEEELEI SKATKKLEQE KLRETEANLK KQTEEWLIAQ
301: DEVNKLKEET VKRLGEANET MEDFMKVKKL LTDVRFELIS SREALVFSRE QMEEKELLLE KQLEELEEQR KSVLSYMQSL RDAHTEVESE RVKLRVVEAK
401: NFALEREISV QKELLEDLRE ELQKEKPLLE LAMHDISVIQ DELYKKANAF QVSQNLLQEK ESSLVEAKLE IQHLKSEQAS LELLLQEKDE ELAEARNKLG
501: EVNQEVTELK ALMISREDQL MEATEMLKEK DVHLHRIEGE LGSSKLKVTE AEMVVERIAE LTNRLLMSTT NGQNQNAMRI NNEISIDSMQ QPLEKPHDDY
601: GMENKRLVME LSFTRENLRM KEMEVLAVQR ALTFKDEEIN VVMGRLEAKE QELKKLKEET INDSEDLKVL YALAQERVGE KTMGDLAIEM LQLEAANLEV
701: EAATSALQKL AKMSTELLTQ ADMSIEADTT HTVMPERGYS EGSNECLGEV KTEVVRLWSL TEKLLENAGI VAGTSTCMEG VIL
Arabidopsis Description
Myosin heavy chain-related protein [Source:UniProtKB/TrEMBL;Acc:Q8H1E5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.