Factsheet for PGSC0003DMT400009055

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
peroxisome 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol, peroxisome, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g084990.2.1	Tomato	nucleus	97.46	97.23
VIT_04s0023g02130.t01	Wine grape	vacuole	76.21	76.21
KRH28716	Soybean	vacuole	74.13	75.53
KRH76746	Soybean	plasma membrane	73.67	67.87
AT5G66460.1	Thale cress	vacuole	65.36	65.66
GSMUA_Achr4P07870_001	Banana	mitochondrion	57.97	65.19
PGSC0003DMT400009479	Potato	cytosol, nucleus, peroxisome	56.35	64.38
GSMUA_Achr4P02940_001	Banana	golgi, vacuole	63.28	64.32
CDY45231	Canola	extracellular, vacuole	67.21	62.05
GSMUA_Achr6P27200_001	Banana	golgi, vacuole	58.2	61.76
PGSC0003DMT400039828	Potato	cytosol	8.78	60.32
GSMUA_Achr9P06930_001	Banana	extracellular	59.12	59.81
TraesCS3D01G241300.1	Wheat	extracellular	58.43	59.53
TraesCS3B01G269200.1	Wheat	extracellular	58.2	59.29
TraesCS3A01G241000.1	Wheat	golgi, vacuole	57.74	58.82
Os01t0663300-01	Rice	endoplasmic reticulum, golgi, vacuole	54.5	58.56
Zm00001d043965_P001	Maize	extracellular, vacuole	57.27	58.22
EES01213	Sorghum	golgi, vacuole	56.35	56.48
OQU79706	Sorghum	vacuole	40.65	56.41
CDX73899	Canola	extracellular	36.95	56.14
PGSC0003DMT400090248	Potato	cytosol	35.33	56.04
PGSC0003DMT400095096	Potato	cytosol	39.72	55.84
HORVU3Hr1G060060.8	Barley	golgi, vacuole	57.27	55.61
PGSC0003DMT400092800	Potato	peroxisome	25.87	55.17
PGSC0003DMT400039735	Potato	cytosol	38.34	53.04
PGSC0003DMT400093759	Potato	cytosol	15.01	52.85
CDY36280	Canola	endoplasmic reticulum, extracellular, vacuole	49.88	52.05
Bra034151.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	49.88	52.05
Bra001383.1-P	Field mustard	extracellular	49.19	51.33
PGSC0003DMT400039596	Potato	vacuole	39.49	51.2
AT3G10890.1	Thale cress	extracellular	48.5	50.72
PGSC0003DMT400092618	Potato	extracellular	15.01	50.39
AT3G10900.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	47.34	50.25
PGSC0003DMT400083217	Potato	cytosol	21.25	49.73
AT3G30540.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	35.57	46.81
PGSC0003DMT400034535	Potato	cytosol, nucleus, vacuole	40.65	44.56
PGSC0003DMT400080203	Potato	endoplasmic reticulum	44.8	43.21
PGSC0003DMT400039582	Potato	vacuole	21.48	42.66
PGSC0003DMT400034196	Potato	golgi, mitochondrion, plastid, vacuole	41.8	40.77
PGSC0003DMT400047236	Potato	vacuole	40.65	39.91
PGSC0003DMT400034545	Potato	cytosol	17.78	37.56
CDY68324	Canola	endoplasmic reticulum, vacuole	66.74	35.12

Protein Annotations

EntrezGene:102588957	MapMan:21.2.3.2.2	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_5
InterPro:Glycoside_hydrolase_SF	UniProt:M0ZVJ2	PFAM:PF00150	EnsemblPlantsGene:PGSC0003DMG400003521	PGSC:PGSC0003DMG400003521	EnsemblPlants:PGSC0003DMT400009055
PANTHER:PTHR31451	PANTHER:PTHR31451:SF18	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002950F7C
RefSeq:XP_006340651.1	SEG:seg	:	:	:	:

Description

Endo-beta-mannanase [Source:PGSC_GENE;Acc:PGSC0003DMG400003521]

Coordinates

chr2:-:40250760..40254403

Molecular Weight (calculated)

49589.5 Da

IEP (calculated)

9.896

GRAVY (calculated)

-0.499

Length

433 amino acids

Sequence
(BLAST)

001: MKKHSAYAFL LIFLLQQVCL FVQVEAGDGF IRTRGIHFML NGDPFYANGF NAYWLMYIAA DPSQRSKVTD AFREASSHGL TVARTWAFSD GGYRPLQYAP
101: GSYNEDMFKG LDFVISEARR HGIKVILSFA NNYESFGGKK QYVNWARSHG QYLNSDDEFF RNSVVKGYYK NHIMTVLNRY NRFSGVVYKN DPTIMAWELM
201: NEPRCTSDQS GRTIQAWATE MASYVKSIDR NHLLEVGLEG FYGQTTQRRN LNPNFDIGTD FIANNRIPGI DFATAHAYPD QWVTNSNDQG QLSFLNNWLD
301: SHIQDAQYIL RKPLLITEFG KSSKDSGFSS YQRDLLYNTV YYKIYSSAKR GGAAAGGLFW QLLSEGMNSF GDGYEIILSQ NPSTANLIAQ QSHKLYQIRK
401: IFARMRNVQR WKRAKAARRG GWTDRNKGKR IGN

Best Arabidopsis Sequence Match ( AT5G66460.1 )
(BLAST)

001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N

Arabidopsis Description

MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.