Factsheet for Bra001383.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73899	Canola	extracellular	68.19	99.3
Bra034151.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	74.46	74.46
AT3G10900.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	68.19	69.36
AT3G30540.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	52.77	66.57
VIT_04s0023g02130.t01	Wine grape	vacuole	54.22	51.96
KRH28716	Soybean	vacuole	52.05	50.82
GSMUA_Achr6P27200_001	Banana	golgi, vacuole	48.92	49.75
TraesCS3A01G241000.1	Wheat	golgi, vacuole	50.84	49.65
Solyc02g084990.2.1	Tomato	nucleus	51.81	49.54
OQU79706	Sorghum	vacuole	37.11	49.36
EES01213	Sorghum	golgi, vacuole	51.33	49.31
PGSC0003DMT400009055	Potato	extracellular, golgi, vacuole	51.33	49.19
TraesCS3D01G241300.1	Wheat	extracellular	50.36	49.18
TraesCS3B01G269200.1	Wheat	extracellular	50.36	49.18
GSMUA_Achr4P02940_001	Banana	golgi, vacuole	49.88	48.59
Zm00001d043965_P001	Maize	extracellular, vacuole	49.4	48.12
GSMUA_Achr9P06930_001	Banana	extracellular	49.16	47.66
HORVU3Hr1G060060.8	Barley	golgi, vacuole	51.08	47.53
GSMUA_Achr4P07870_001	Banana	mitochondrion	44.1	47.53
KRH76746	Soybean	plasma membrane	52.05	45.96
Os01t0663300-01	Rice	endoplasmic reticulum, golgi, vacuole	44.34	45.66
Bra033312.1-P	Field mustard	golgi, vacuole	43.86	44.28
Bra036494.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	29.16	41.87
Bra031137.1-P	Field mustard	golgi, vacuole	38.8	37.27
Bra036493.1-P	Field mustard	vacuole	37.83	37.12
Bra026266.1-P	Field mustard	vacuole	37.83	36.43
Bra005662.1-P	Field mustard	nucleus	42.65	27.92

Protein Annotations

EnsemblPlants:Bra001383.1	EnsemblPlants:Bra001383.1-P	EnsemblPlantsGene:Bra001383	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31451	PANTHER:PTHR31451:SF18	PFAM:PF00150	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF51445	UniParc:UPI00025406A8	UniProt:M4CB04	MapMan:21.2.3.2.2	:

Description

AT3G10890 (E=1e-174) | (1-4)-beta-mannan endohydrolase, putative

Coordinates

chrA03:-:16100011..16102048

Molecular Weight (calculated)

46183.8 Da

IEP (calculated)

7.612

GRAVY (calculated)

-0.276

Length

415 amino acids

Sequence
(BLAST)

001: MKCLCLIVFL AFVITQSYND LEVEAVSSDG FVSRKGVQFI LNGEPFYANG FNAYWLMYEA TDPNTRYKVT HALENAAGQG LTIARTWGFR DGGYRALQTN
101: LGSYDEQTFQ GLDFAIAEAK RVGIKMIIAF VNNFPDFGGK KQYMAWAKDK GQAVTSEDDF YTNALLKQAY MNHVKTVLNR VNTFTKVAYK DEPTIMAWEL
201: MNEPQCRADT SGKTLTAWIS EMASYVKSLD SKHLLSTGSE GFYGQSTPQR MTSLNPVAAN IVGSDFIANH NIDAIDFASV HSYPDTWFPK LDEKSLLDYL
301: RKNLAGHIED AQNVLKKPLI LGEFGKPSNA PGYTQAQRDA VFTTAFDIIY ASAQKGGAAA GALFWHLISD DMSNFTDAYS ISLSEKSSTI TIIGQQSRKM
401: NLIGRKRKPG RENKI

Best Arabidopsis Sequence Match ( AT3G10890.1 )
(BLAST)

001: MKCLCFVVLL AILIAQNSSD LGVKSASSDG FVSRKGVQFI LNGKPFYANG FNAYWLAYEA TDSTTRFKIT YVFQNATIHD LTIVRTWGFR DGGYRALQIA
101: PGVYDEKTFQ GLDFAIAEAK RLGIKMIITF VNNYSDFGGR KQYVDWAKNT GQNVSSDDDF YTNPLVKQYY KNHVKTMVNR VNTFTKVEYK DEPTIMGWEL
201: MNEPQCRADP SGKTLTAWMN EMALYVKSVD SKHLLSTGLE GFYGDSSPQR KTSLNPVAAN VLGTDFIANH KLDAIDFASI HSYPDLWFPN LDEKSRLNLL
301: RKWLECHLED AQNILKKPLI LGEFGKPTNT PGYTQAQRDA VFNATFDTIY ESAEKGGPAA GALFWHVISD GMNNFKDPLS IVLSENSTTV NIITEESRKL
401: GLIRGKGKLS KTKI

Arabidopsis Description

MAN3Mannan endo-1,4-beta-mannosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SG94]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.