Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 6
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G241300.1 Wheat extracellular 75.93 72.0
TraesCS3A01G241000.1 Wheat golgi, vacuole 75.43 71.53
TraesCS3B01G269200.1 Wheat extracellular 75.19 71.29
HORVU3Hr1G060060.8 Barley golgi, vacuole 75.19 67.94
Zm00001d043965_P001 Maize extracellular, vacuole 71.71 67.84
EES01213 Sorghum golgi, vacuole 72.46 67.59
OQU79706 Sorghum vacuole 50.87 65.71
GSMUA_Achr4P07870_001 Banana mitochondrion 57.57 60.26
GSMUA_Achr4P02940_001 Banana golgi, vacuole 63.03 59.62
KRH61141 Soybean cytosol, nucleus, vacuole 58.81 58.52
VIT_18s0001g12830.t01 Wine grape extracellular, vacuole 61.79 57.51
KRH51830 Soybean endoplasmic reticulum, vacuole 59.8 57.38
VIT_04s0023g02130.t01 Wine grape vacuole 61.04 56.81
PGSC0003DMT400009479 Potato cytosol, nucleus, peroxisome 52.61 55.94
KRH28716 Soybean vacuole 58.31 55.29
Solyc02g084990.2.1 Tomato nucleus 59.06 54.84
PGSC0003DMT400009055 Potato extracellular, golgi, vacuole 58.56 54.5
AT5G66460.1 Thale cress vacuole 58.06 54.29
CDX73899 Canola extracellular 37.97 53.68
KRH15168 Soybean extracellular, golgi, vacuole 56.08 52.68
KRH05852 Soybean extracellular, golgi, vacuole 56.08 52.31
Solyc04g080620.2.1 Tomato endoplasmic reticulum, vacuole 53.35 52.06
KRH76746 Soybean plasma membrane 58.56 50.21
CDY45231 Canola extracellular, vacuole 57.82 49.68
Os11t0118200-01 Rice cytosol 24.81 49.51
Os03t0828300-01 Rice extracellular, vacuole 21.34 45.5
CDY36280 Canola endoplasmic reticulum, extracellular, vacuole 46.4 45.06
Bra034151.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 46.4 45.06
Bra001383.1-P Field mustard extracellular 45.66 44.34
AT3G10900.1 Thale cress endoplasmic reticulum, extracellular, vacuole 44.66 44.12
Os12t0117300-00 Rice cytosol 40.94 43.19
AT3G10890.1 Thale cress extracellular 44.17 43.0
AT3G30540.1 Thale cress endoplasmic reticulum, extracellular, vacuole 34.99 42.86
Os03t0828500-01 Rice plasma membrane, plastid, vacuole 46.4 40.56
Os01t0746700-00 Rice endoplasmic reticulum, plasma membrane, vacuole 44.66 40.45
Os05t0319100-00 Rice extracellular 47.64 39.1
Os06t0311600-01 Rice golgi, vacuole 41.44 37.95
Os02t0766900-00 Rice extracellular, golgi, vacuole 33.25 31.38
CDY68324 Canola endoplasmic reticulum, vacuole 57.82 28.31
Protein Annotations
MapMan:21.2.3.2.2Gene3D:3.20.20.80ProteinID:BAS73552.1GO:GO:0003674GO:GO:0003824GO:GO:0004553
GO:GO:0005575GO:GO:0005576GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0016787GO:GO:0016798GO:GO:0016985GO:GO:0046355InterPro:Glyco_hydro_5
InterPro:Glyco_hydro_5_CSInterPro:Glycoside_hydrolase_SFEnsemblPlantsGene:Os01g0663300EnsemblPlants:Os01t0663300-01PFAM:PF00150ScanProsite:PS00659
PANTHER:PTHR31451PANTHER:PTHR31451:SF18SUPFAM:SSF51445SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0000DD8C4E
SEG:seg:::::
Description
Similar to (1-4)-beta-mannan endohydrolase-like protein. (Os01t0663300-01)
Coordinates
chr1:+:27081819..27085661
Molecular Weight (calculated)
43676.8 Da
IEP (calculated)
9.393
GRAVY (calculated)
-0.205
Length
403 amino acids
Sequence
(BLAST)
001: MRLLGAHRAA LLVLACVVVV VIHGLGEAEA LGGGGGFVRA QGTRFVLDGN PYYANGFNAY WLMLLAADPS QRGKVSAALG EAAGHGLTVA RTWAFSDGGG
101: GNALQLSPGN YNENTFKGLD FVLSEARKYG IKVILSLVDN YDSFGGRKQY VNWARAQGQG IGSDDEFFTN PVVKGFYKNH VKTVLTRKNT ITGVAYRDDP
201: TILAWELMNE PRCQSDLSGR TVQSWITEMA AHVKSIDRNH MLEVGLEGFY GASSPSRIAA VNPSGYQLGT DFIANNQVPG IDFATVHSYP DQWLSGKDDQ
301: AQLGFMGRWL DAHIADALYG TVYAKIYESA RRGGATVGGL FWQLLVPGMD SYRDGYEVVF GETPSTTGVI TTNSRRLRFL SKAFARARQA QPARGKGRHN
401: GGK
Best Arabidopsis Sequence Match ( AT5G66460.1 )
(BLAST)
001: MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS
101: PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL
201: MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW
301: LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI
401: RKIFARMINV EKWKRARGQG QVGKRGHKIN N
Arabidopsis Description
MAN7MAN7 [Source:UniProtKB/TrEMBL;Acc:A0A178UNQ8]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.