Factsheet for Os12t0117300-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0118200-01	Rice	cytosol	50.0	94.55
HORVU4Hr1G058920.3	Barley	cytosol	36.65	83.33
HORVU3Hr1G057870.3	Barley	cytosol	35.08	82.72
TraesCS5D01G145900.1	Wheat	cytosol	81.68	80.83
HORVU5Hr1G083060.1	Barley	cytosol, plastid, vacuole	30.89	76.62
HORVU3Hr1G003960.2	Barley	cytosol	22.77	75.65
TraesCS5A01G146400.1	Wheat	mitochondrion, plasma membrane, plastid, vacuole	81.68	74.29
TraesCS5B01G145200.1	Wheat	mitochondrion, plasma membrane, vacuole	81.41	74.05
HORVU5Hr1G046370.1	Barley	mitochondrion	81.41	74.05
HORVU5Hr1G083020.2	Barley	extracellular, mitochondrion, plastid, vacuole	24.61	72.87
EES09143	Sorghum	cytosol, plasma membrane, plastid, vacuole	77.23	69.09
Zm00001d005052_P002	Maize	plasma membrane	77.75	68.59
HORVU6Hr1G036770.2	Barley	cytosol	21.47	65.6
GSMUA_Achr7P22010_001	Banana	cytosol	69.37	64.01
VIT_08s0058g01460.t01	Wine grape	cytosol, nucleus, plastid, vacuole	58.38	54.66
PGSC0003DMT400080203	Potato	endoplasmic reticulum	60.73	51.67
HORVU6Hr1G009620.1	Barley	cytosol	21.2	51.59
VIT_08s0058g01480.t01	Wine grape	cytosol, mitochondrion, vacuole	60.21	51.34
Solyc10g074920.1.1	Tomato	extracellular	60.21	51.22
KRH64877	Soybean	endoplasmic reticulum	57.33	47.3
KRH00473	Soybean	nucleus	56.02	46.32
CDY11173	Canola	endoplasmic reticulum, vacuole	53.4	46.15
AT5G01930.1	Thale cress	endoplasmic reticulum	52.36	44.64
KRH40712	Soybean	nucleus	56.54	44.17
KRH09553	Soybean	endoplasmic reticulum, plastid, vacuole	56.81	43.75
Os03t0828300-01	Rice	extracellular, vacuole	21.2	42.86
Os05t0319100-00	Rice	extracellular	54.45	42.36
Os01t0746700-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	47.91	41.12
Os01t0663300-01	Rice	endoplasmic reticulum, golgi, vacuole	43.19	40.94
Os03t0828500-01	Rice	plasma membrane, plastid, vacuole	43.98	36.44
Os06t0311600-01	Rice	golgi, vacuole	40.58	35.23
Bra005662.1-P	Field mustard	nucleus	53.4	32.18
CDY61603	Canola	nucleus	45.03	24.4
Os02t0766900-00	Rice	extracellular, golgi, vacuole	26.7	23.89

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	EntrezGene:9271116	UniProt:B9GBJ3	ProteinID:BAT15617.1	ProteinID:EEE52650.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0016985	GO:GO:0046355
InterPro:Glyco_hydro_5	InterPro:Glyco_hydro_5_CS	InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:Os12g0117300	EnsemblPlants:Os12t0117300-00	PFAM:PF00150
ScanProsite:PS00659	PANTHER:PTHR31451	PANTHER:PTHR31451:SF9	SUPFAM:SSF51445	UniParc:UPI0001935724	RefSeq:XP_015620164.1
SEG:seg	:	:	:	:	:

Description

Similar to Mannan endo-1,4-beta-mannosidase 8. (Os12t0117300-00)

Coordinates

chr12:-:858569..860590

Molecular Weight (calculated)

43123.7 Da

IEP (calculated)

4.745

GRAVY (calculated)

-0.215

Length

382 amino acids

Sequence
(BLAST)

001: MEDAHHHHWT MVECSGTQLW ASGRPFIIHG FNTYWLMSFA ADQATRPRVT AAIAEAAEAG LNVCRTWAFS DGGYRALQTV PFHYDEDVFQ ALDFVVSEAK
101: RHNMRLILSL CNNWEDYGGK AQYVRWGKEA GLDLTSEDDF FSDPTIKSYY KAFVEAVVTR INTVTNETYK DDPTILAWEL INEPRCPSDP SGDTLQAWIE
201: EMASYVKSID PVHLLEIGIE GFYGLSTPEL LPVNPDEYSG HAGTDFIRNH QAPGIDLASI HVYSDTWLPH SIKENHLQFV DKWMQQHIHD AANLLGMPIV
301: VGEFGVSVKD GKFGNEFRED FMKTVYRIFL SSWKEGVIGG GCLLWQLFPE GAEHMDDGYA VIFAKSPSTL SLLANHLRCL EC

Best Arabidopsis Sequence Match ( AT5G01930.1 )
(BLAST)

001: MKDQLGFRIV LCSAVFIILT QNRALADLDS ESHEVNSESV GEEQWEMVQR KGMQFTLNGQ PFYVNGFNTY WMMTLAADNS TRGKVTEVFQ QASAVGMTVG
101: RTWAFNDGQW RALQKSPSVY DEEVFKALDF VLSEARKYKI RLILSLVNNW DAYGGKAQYV KWGNASGLNL TSDDDFFTNP TLRNFYQSHV RTVLNRVNTF
201: TNITYKNDPT IFAWELMNEP RCPSDPSGDK LQSWIQEMAV FVKSLDAKHL VEIGLEGFYG PSAPARTRFN PNPYAAQVGT DFIRNNQVLG IDFASVHVYP
301: DSWISPAVSN SFLEFTSSWM QAHVEDAEMY LGMPVLFTEF GVSAHDPGFN TSFRDMMLNT VYKMTLNSTR KGGAGAGSLV WQVFPQGAEF MDDGYAVYLT
401: RAHTASKIIS LQSKRLAIFN SLCSWRCRWG CKKKNQTALD ALLSHDEL

Arabidopsis Description

MAN6Mannan endo-1,4-beta-mannosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.