Factsheet for GSMUA_Achr7P22010_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G057870.3	Barley	cytosol	29.23	74.69
HORVU4Hr1G058920.3	Barley	cytosol	29.95	73.81
Os11t0118200-01	Rice	cytosol	35.51	72.77
HORVU5Hr1G083060.1	Barley	cytosol, plastid, vacuole	26.33	70.78
HORVU5Hr1G083020.2	Barley	extracellular, mitochondrion, plastid, vacuole	21.98	70.54
Os12t0117300-00	Rice	cytosol	64.01	69.37
TraesCS5D01G145900.1	Wheat	cytosol	64.25	68.91
HORVU3Hr1G003960.2	Barley	cytosol	18.84	67.83
TraesCS5B01G145200.1	Wheat	mitochondrion, plasma membrane, vacuole	64.49	63.57
TraesCS5A01G146400.1	Wheat	mitochondrion, plasma membrane, plastid, vacuole	64.25	63.33
HORVU5Hr1G046370.1	Barley	mitochondrion	64.25	63.33
EES09143	Sorghum	cytosol, plasma membrane, plastid, vacuole	65.22	63.23
HORVU6Hr1G036770.2	Barley	cytosol	19.08	63.2
Zm00001d005052_P002	Maize	plasma membrane	64.25	61.43
VIT_08s0058g01460.t01	Wine grape	cytosol, nucleus, plastid, vacuole	59.42	60.29
VIT_08s0058g01480.t01	Wine grape	cytosol, mitochondrion, vacuole	59.66	55.13
Solyc10g074920.1.1	Tomato	extracellular	58.7	54.12
PGSC0003DMT400080203	Potato	endoplasmic reticulum	58.21	53.67
KRH64877	Soybean	endoplasmic reticulum	59.18	52.92
GSMUA_Achr6P12740_001	Banana	extracellular, vacuole	31.88	52.59
KRH00473	Soybean	nucleus	58.21	52.16
GSMUA_Achr3P09750_001	Banana	endoplasmic reticulum	58.45	52.16
CDY11173	Canola	endoplasmic reticulum, vacuole	54.11	50.68
AT5G01930.1	Thale cress	endoplasmic reticulum	53.62	49.55
KRH40712	Soybean	nucleus	57.97	49.08
HORVU6Hr1G009620.1	Barley	cytosol	18.6	49.04
KRH09553	Soybean	endoplasmic reticulum, plastid, vacuole	58.45	48.79
GSMUA_Achr6P27200_001	Banana	golgi, vacuole	47.1	47.79
GSMUA_Achr6P12730_001	Banana	golgi, vacuole	45.17	45.5
GSMUA_Achr4P07870_001	Banana	mitochondrion	42.27	45.45
GSMUA_Achr6P30560_001	Banana	vacuole	45.65	45.43
GSMUA_Achr9P06930_001	Banana	extracellular	45.65	44.16
GSMUA_Achr4P02940_001	Banana	golgi, vacuole	45.41	44.13
GSMUA_Achr9P08250_001	Banana	vacuole	47.58	43.78
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	40.82	43.11
GSMUA_Achr5P22340_001	Banana	cytosol	39.86	41.88
GSMUA_Achr1P04970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	43.72	41.51
GSMUA_Achr6P28970_001	Banana	extracellular, golgi	21.98	41.36
GSMUA_Achr8P24410_001	Banana	mitochondrion	34.78	41.03
GSMUA_Achr8P20030_001	Banana	golgi, plastid, vacuole	43.0	39.73
GSMUA_Achr3P12210_001	Banana	cytosol	44.2	38.45
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	42.75	36.72
Bra005662.1-P	Field mustard	nucleus	54.11	35.33
CDY61603	Canola	nucleus	47.34	27.8

Protein Annotations

EnsemblPlants:GSMUA_Achr7P22010_001	EnsemblPlants:GSMUA_Achr7T22010_001	EnsemblPlantsGene:GSMUA_Achr7G22010_001	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31451	PANTHER:PTHR31451:SF9	PFAM:PF00150	SEG:seg
SUPFAM:SSF51445	UniParc:UPI000295EE24	UniProt:M0TJN7	MapMan:21.2.3.2.2	:	:

Description

Mannan endo-1,4-beta-mannosidase 7 [Source:GMGC_GENE;Acc:GSMUA_Achr7G22010_001]

Coordinates

chr7:-:24603569..24605389

Molecular Weight (calculated)

46855.1 Da

IEP (calculated)

5.708

GRAVY (calculated)

-0.397

Length

414 amino acids

Sequence
(BLAST)

001: MSGMEGEEWG AVERRGTHFV VQGRPFLVHG FNTYWLMVFA ADPATRCKVS DVFKDAAAAG LTVCRTWAFN DGGWRALQIS PFVYDEEVFK GLDFVVSEAR
101: THGMRLMLSL CNNWEDYGGK AQYVRWGKEA GVDLSGDDDF FSDPTVKSYY KAFVKTVITR VNTITNVAYK DDPTIMAWEL INEPRCPSDP SGDTLQAWFE
201: EMAAYVKSID PTHLLEIGVE GFYGPSTPER LQLNPNTCAG DAGTDFIRNH RVAGVDFASV HVYSDTWLPD PDSNAHLQFV RAWMHQHMDD AEKLLGMPVV
301: FGEFGVSVKD ERFESRFRET FMETVYDTLL SSRMRRDVGG GCLVWQLFPE GTEHMDDGYA VVLADSPSTL DMLSQHSRNL QTHHSKGSCG IHHSKYKQGK
401: KRRRNRSIQI FCNE

Best Arabidopsis Sequence Match ( AT5G01930.1 )
(BLAST)

001: MKDQLGFRIV LCSAVFIILT QNRALADLDS ESHEVNSESV GEEQWEMVQR KGMQFTLNGQ PFYVNGFNTY WMMTLAADNS TRGKVTEVFQ QASAVGMTVG
101: RTWAFNDGQW RALQKSPSVY DEEVFKALDF VLSEARKYKI RLILSLVNNW DAYGGKAQYV KWGNASGLNL TSDDDFFTNP TLRNFYQSHV RTVLNRVNTF
201: TNITYKNDPT IFAWELMNEP RCPSDPSGDK LQSWIQEMAV FVKSLDAKHL VEIGLEGFYG PSAPARTRFN PNPYAAQVGT DFIRNNQVLG IDFASVHVYP
301: DSWISPAVSN SFLEFTSSWM QAHVEDAEMY LGMPVLFTEF GVSAHDPGFN TSFRDMMLNT VYKMTLNSTR KGGAGAGSLV WQVFPQGAEF MDDGYAVYLT
401: RAHTASKIIS LQSKRLAIFN SLCSWRCRWG CKKKNQTALD ALLSHDEL

Arabidopsis Description

MAN6Mannan endo-1,4-beta-mannosidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZV3]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.