Factsheet for GSMUA_Achr1P04970_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	75.0	83.42
Bra036494.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	46.33	69.9
VIT_12s0028g03610.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	66.06	66.67
AT2G20680.1	Thale cress	plasma membrane, vacuole	64.91	65.36
GSMUA_Achr8P20030_001	Banana	golgi, plastid, vacuole	66.97	65.18
CDY31945	Canola	vacuole	62.16	64.07
Bra036493.1-P	Field mustard	vacuole	62.16	64.07
CDY05783	Canola	extracellular, plasma membrane, vacuole	63.07	63.81
CDX81978	Canola	golgi, vacuole	63.07	63.66
CDY13860	Canola	golgi, vacuole	63.07	63.66
Bra031137.1-P	Field mustard	golgi, vacuole	63.07	63.66
Os01t0746700-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	63.99	62.7
CDX89187	Canola	vacuole	61.7	62.41
Bra026266.1-P	Field mustard	vacuole	61.7	62.41
CDY18983	Canola	vacuole	61.47	62.18
TraesCS3B01G307900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	63.3	62.16
KRH22381	Soybean	vacuole	61.01	62.15
KRH26952	Soybean	extracellular, plasma membrane, vacuole	61.01	62.15
KRH25580	Soybean	mitochondrion	61.93	61.93
KRH55954	Soybean	mitochondrion, vacuole	61.93	61.93
TraesCS3D01G273400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	63.07	61.8
AT4G28320.1	Thale cress	vacuole	61.01	61.72
PGSC0003DMT400047236	Potato	vacuole	62.39	61.68
Zm00001d043443_P001	Maize	plasma membrane	63.99	61.59
TraesCS3A01G274200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	62.61	61.49
EES03598	Sorghum	endoplasmic reticulum, vacuole	64.91	61.39
Solyc07g053920.2.1	Tomato	vacuole	61.93	61.22
PGSC0003DMT400034196	Potato	golgi, mitochondrion, plastid, vacuole	61.47	60.36
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	66.51	60.17
Solyc10g008300.2.1	Tomato	golgi, mitochondrion, vacuole	60.78	59.68
HORVU3Hr1G071210.3	Barley	extracellular, plasma membrane, vacuole	63.99	59.62
GSMUA_Achr5P22340_001	Banana	cytosol	50.0	55.33
GSMUA_Achr8P24410_001	Banana	mitochondrion	41.28	51.28
GSMUA_Achr6P12740_001	Banana	extracellular, vacuole	27.29	47.41
GSMUA_Achr4P07870_001	Banana	mitochondrion	39.45	44.68
GSMUA_Achr4P02940_001	Banana	golgi, vacuole	43.35	44.37
GSMUA_Achr6P30560_001	Banana	vacuole	42.2	44.23
GSMUA_Achr6P27200_001	Banana	golgi, vacuole	41.28	44.12
GSMUA_Achr7P22010_001	Banana	cytosol	41.51	43.72
GSMUA_Achr9P06930_001	Banana	extracellular	42.89	43.69
GSMUA_Achr6P12730_001	Banana	golgi, vacuole	39.68	42.09
GSMUA_Achr3P09750_001	Banana	endoplasmic reticulum	40.6	38.15
GSMUA_Achr9P08250_001	Banana	vacuole	38.99	37.78
GSMUA_Achr3P12210_001	Banana	cytosol	40.83	37.4
GSMUA_Achr6P28970_001	Banana	extracellular, golgi	18.58	36.82

Protein Annotations

EnsemblPlants:GSMUA_Achr1P04970_001	EnsemblPlants:GSMUA_Achr1T04970_001	EnsemblPlantsGene:GSMUA_Achr1G04970_001	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31451	PANTHER:PTHR31451:SF1	PFAM:PF00150	SEG:seg
SUPFAM:SSF51445	TMHMM:TMhelix	UniParc:UPI0002967363	UniProt:M0RX55	MapMan:21.2.3.2.2	:

Description

Mannan endo-1,4-beta-mannosidase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr1G04970_001]

Coordinates

chr1:-:4110283..4112238

Molecular Weight (calculated)

49499.7 Da

IEP (calculated)

5.817

GRAVY (calculated)

-0.333

Length

436 amino acids

Sequence
(BLAST)

001: MMLANNGALY PVLGLASCVA LVYMSFGDLA LDLSTHAREP EMSFVGRNGT RFTMDGKAFY VNGWNSYWLM DQAVEEISRP RVKAMFQAGA KMGLTVCRTW
101: AFNDGGYNAL QVSLGHFDEH VFQALDRVIV EAKRHGIRLL LSLANNLEAY GGKTQYVKWA WEEGIGLSSS NDSFFFDPSI RSHFKTYLKT VLTRKNRLNG
201: IQYKDEPTIF AWELMNEPRC MSDPSGDTLQ DWIEELAAYV KSIDKNHLLT VGLEGFYGPA SSPEKLKVNP GQWFGTLGSD FIRNSKVSDI DFASVHIYPD
301: QWQVGAGLEE KMKYISGWLT SHIEDGEEEL KKPVLFTEFG LSDKSRDFDH AHRDVFYESI FDVVYESARR GGAGAGALVW QFMAAGMQEY SDDFGIVPEE
401: RSSMYRLIKK QSCRLMRLSH GRDWMKRRDS ETFCAE

Best Arabidopsis Sequence Match ( AT2G20680.1 )
(BLAST)

001: MAAPTGNGPV IPILGFLTCV AFIYLSFGDL WFGLKTEGEL AFVKRNGTQF VVDGKALYVN GWNSYWFMDH AVNDHSRHRV SAMLEAGAKM GLTVCRTWAF
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP

Arabidopsis Description

MAN2Mannan endo-1,4-beta-mannosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y223]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.