Factsheet for Bra031137.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

cytosol 2
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13860	Canola	golgi, vacuole	100.0	100.0
CDX81978	Canola	golgi, vacuole	98.84	98.84
Bra036494.1-P	Field mustard	endoplasmic reticulum, plasma membrane, vacuole	63.19	94.46
Bra036493.1-P	Field mustard	vacuole	89.81	91.73
AT2G20680.1	Thale cress	plasma membrane, vacuole	89.81	89.61
Bra026266.1-P	Field mustard	vacuole	80.09	80.28
Solyc07g053920.2.1	Tomato	vacuole	70.14	68.71
VIT_12s0028g03610.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	68.52	68.52
PGSC0003DMT400047236	Potato	vacuole	69.91	68.48
KRH22381	Soybean	vacuole	67.59	68.22
KRH26952	Soybean	extracellular, plasma membrane, vacuole	67.13	67.76
KRH55954	Soybean	mitochondrion, vacuole	67.82	67.2
KRH25580	Soybean	mitochondrion	67.59	66.97
PGSC0003DMT400034196	Potato	golgi, mitochondrion, plastid, vacuole	68.52	66.67
Solyc10g008300.2.1	Tomato	golgi, mitochondrion, vacuole	68.29	66.44
GSMUA_Achr5P09360_001	Banana	endoplasmic reticulum, extracellular, vacuole	58.8	64.8
GSMUA_Achr1P04970_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	63.66	63.07
GSMUA_Achr8P20030_001	Banana	golgi, plastid, vacuole	59.72	57.59
TraesCS3A01G274200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	58.8	57.21
TraesCS3B01G307900.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	58.33	56.76
TraesCS3D01G273400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	57.87	56.18
Os01t0746700-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	57.64	55.96
Zm00001d043443_P001	Maize	plasma membrane	58.56	55.85
EES03598	Sorghum	endoplasmic reticulum, vacuole	58.56	54.88
GSMUA_Achr10P...	Banana	nucleus, plasma membrane, plastid, vacuole	60.42	54.15
HORVU3Hr1G071210.3	Barley	extracellular, plasma membrane, vacuole	58.33	53.85
Bra033312.1-P	Field mustard	golgi, vacuole	39.35	41.36
Bra034151.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	39.58	41.2
Bra001383.1-P	Field mustard	extracellular	37.27	38.8
Bra005662.1-P	Field mustard	nucleus	42.13	28.71

Protein Annotations

MapMan:21.2.3.2.2	Gene3D:3.20.20.80	EnsemblPlantsGene:Bra031137	EnsemblPlants:Bra031137.1	EnsemblPlants:Bra031137.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF
UniProt:M4EQR4	PFAM:PF00150	PANTHER:PTHR31451	PANTHER:PTHR31451:SF1	SUPFAM:SSF51445	TMHMM:TMhelix
UniParc:UPI00025428FF	SEG:seg	:	:	:	:

Description

AT2G20680 (E=1e-232) | glycosyl hydrolase family 5 protein / cellulase family protein

Coordinates

chrA09:-:32325883..32327749

Molecular Weight (calculated)

49710.0 Da

IEP (calculated)

7.057

GRAVY (calculated)

-0.428

Length

432 amino acids

Sequence
(BLAST)

001: MSPPGNGPMV PILGFLTCVA FLYLSFGDLW FDYNREAELG FVSRNGTQFV LDGKPLYVNG WNSYWFMDHA VNDHSRHRVG AMLEAGSKMG LTVCRTWAFN
101: DGGYNALQIS PGRFDERVFK ALDHVIAEAK THGVRLLLSL VNNLQNYGGK TQYVNWAWQE GVGLSSSNDS FFFDPSIRRY FKNYLTVLLT RKNSITGIEY
201: RNDPTIFAWE LINEPRCLTD ISGDTLQDWI NEMTAFIKSI DKKHLLTVGL EGFYGPKSPK RLTVNPERWA SELGSDFVRN SESPNIDFAS VHIYPDHWFH
301: DQGFEENLKF AVKWMQSHME DGDKELKKPV LFTEFGLSNM NKDYEPSQRD RFYRTIFDVI YKSAKRKRSG AGTLVWQFLI QGMEGFNDEF GIVPWEKDSI
401: QRLMMEQSCR LGRVTGRLLQ DKKSTEVCSN KP

Best Arabidopsis Sequence Match ( AT2G20680.1 )
(BLAST)

001: MAAPTGNGPV IPILGFLTCV AFIYLSFGDL WFGLKTEGEL AFVKRNGTQF VVDGKALYVN GWNSYWFMDH AVNDHSRHRV SAMLEAGAKM GLTVCRTWAF
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP

Arabidopsis Description

MAN2Mannan endo-1,4-beta-mannosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y223]
SUBAcon: [plasma membrane,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.