Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- vacuole 4
- cytosol 1
- extracellular 2
- endoplasmic reticulum 2
- plasma membrane 2
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
28499913
|
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH55954 | Soybean | mitochondrion, vacuole | 98.39 | 98.39 |
| KRH22381 | Soybean | vacuole | 78.67 | 80.14 |
| KRH26952 | Soybean | extracellular, plasma membrane, vacuole | 77.52 | 78.97 |
| Bra036494.1-P | Field mustard | endoplasmic reticulum, plasma membrane, vacuole | 48.85 | 73.7 |
| VIT_12s0028g03610.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 69.72 | 70.37 |
| CDY05783 | Canola | extracellular, plasma membrane, vacuole | 67.89 | 68.68 |
| AT2G20680.1 | Thale cress | plasma membrane, vacuole | 67.66 | 68.13 |
| Bra036493.1-P | Field mustard | vacuole | 66.06 | 68.09 |
| CDY31945 | Canola | vacuole | 66.06 | 68.09 |
| Bra031137.1-P | Field mustard | golgi, vacuole | 66.97 | 67.59 |
| CDY13860 | Canola | golgi, vacuole | 66.97 | 67.59 |
| CDX81978 | Canola | golgi, vacuole | 66.51 | 67.13 |
| AT4G28320.1 | Thale cress | vacuole | 65.14 | 65.89 |
| PGSC0003DMT400034196 | Potato | golgi, mitochondrion, plastid, vacuole | 66.97 | 65.77 |
| Solyc10g008300.2.1 | Tomato | golgi, mitochondrion, vacuole | 66.51 | 65.32 |
| Solyc07g053920.2.1 | Tomato | vacuole | 66.06 | 65.31 |
| PGSC0003DMT400047236 | Potato | vacuole | 66.06 | 65.31 |
| Bra026266.1-P | Field mustard | vacuole | 64.45 | 65.2 |
| CDY18983 | Canola | vacuole | 64.45 | 65.2 |
| CDX89187 | Canola | vacuole | 64.45 | 65.2 |
| GSMUA_Achr5P09360_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 58.26 | 64.8 |
| GSMUA_Achr1P04970_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 61.93 | 61.93 |
| GSMUA_Achr8P20030_001 | Banana | golgi, plastid, vacuole | 58.26 | 56.7 |
| TraesCS3B01G307900.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 55.73 | 54.73 |
| TraesCS3A01G274200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 55.28 | 54.28 |
| TraesCS3D01G273400.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 55.28 | 54.16 |
| GSMUA_Achr10P... | Banana | nucleus, plasma membrane, plastid, vacuole | 59.63 | 53.94 |
| Zm00001d043443_P001 | Maize | plasma membrane | 55.96 | 53.86 |
| Os01t0746700-00 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 54.36 | 53.26 |
| EES03598 | Sorghum | endoplasmic reticulum, vacuole | 55.96 | 52.93 |
| HORVU3Hr1G071210.3 | Barley | extracellular, plasma membrane, vacuole | 56.19 | 52.35 |
| KRG96685 | Soybean | golgi, vacuole | 40.14 | 41.77 |
| KRH28716 | Soybean | vacuole | 39.68 | 40.71 |
| KRH64877 | Soybean | endoplasmic reticulum | 43.12 | 40.6 |
| KRH23949 | Soybean | vacuole | 37.84 | 40.54 |
| KRH39855 | Soybean | vacuole | 37.84 | 40.54 |
| KRH00473 | Soybean | nucleus | 42.66 | 40.26 |
| KRH68408 | Soybean | vacuole | 38.3 | 40.24 |
| KRH68364 | Soybean | vacuole | 37.39 | 39.76 |
| KRG96633 | Soybean | nucleus | 36.93 | 39.27 |
| KRH61141 | Soybean | cytosol, nucleus, vacuole | 36.47 | 39.26 |
| KRH40712 | Soybean | nucleus | 43.12 | 38.45 |
| KRH15168 | Soybean | extracellular, golgi, vacuole | 37.39 | 38.0 |
| KRH05852 | Soybean | extracellular, golgi, vacuole | 37.61 | 37.96 |
| KRH51830 | Soybean | endoplasmic reticulum, vacuole | 36.47 | 37.86 |
| KRH09553 | Soybean | endoplasmic reticulum, plastid, vacuole | 42.43 | 37.3 |
| KRH76746 | Soybean | plasma membrane | 40.14 | 37.23 |
| KRH33420 | Soybean | extracellular, golgi | 27.98 | 35.88 |
Protein Annotations
| EntrezGene:100811461 | MapMan:21.2.3.2.2 | Gene3D:3.20.20.80 | EMBL:ACUP02007290 | EnsemblPlantsGene:GLYMA_12G113400 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016798 |
| GO:GO:0016985 | GO:GO:0046355 | InterPro:Glyco_hydro_5 | InterPro:Glycoside_hydrolase_SF | UniProt:I1LS27 | EnsemblPlants:KRH25580 |
| ProteinID:KRH25580 | ProteinID:KRH25580.1 | PFAM:PF00150 | PANTHER:PTHR31451 | PANTHER:PTHR31451:SF1 | SUPFAM:SSF51445 |
| TMHMM:TMhelix | UniParc:UPI000233C735 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr12:-:11135703..11140450
Molecular Weight (calculated)
50339.1 Da
IEP (calculated)
7.607
GRAVY (calculated)
-0.283
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MLHKVCKRYR IMVSGNGLFY PVVGFASIVL FIYMSFGDVR FGFEEEAELA FVERNGTQFM VDGKAFYING WNSYWLMVQS VDEYSRPKVR EMLRAGAKMG
101: LTVCRTWAFN DGDYNALQSS PGVFNEQAFK ALDYVIAEAR QHGIRLLLSL VNNLHAYGGK TQYVKWAWQE GVGLSSSNDS FFFDPSIRSY FKNYVKTILT
201: RKNTITGIEY RNDPTIFGWE LINEPRCLTD PSGDTLQDWI EEMSAFVKLI DKRHLVTVGL EGFYGPNDPK RLTVNPEDWA SRLGSDFIRN SKISNIDFTS
301: VHIYPDHWFH HQVFEDYMKF VSKWMLSHIE DGDKVLNKPV LFSEYGLSDI NFTMPERKTM YKTILDISYK SAKKNRSGAG ALVWQFLVGG MQEFTDDFGI
401: IPWEKTPIPS LFVEQSCRLA KTKGWPHKDT SFKQFC
101: LTVCRTWAFN DGDYNALQSS PGVFNEQAFK ALDYVIAEAR QHGIRLLLSL VNNLHAYGGK TQYVKWAWQE GVGLSSSNDS FFFDPSIRSY FKNYVKTILT
201: RKNTITGIEY RNDPTIFGWE LINEPRCLTD PSGDTLQDWI EEMSAFVKLI DKRHLVTVGL EGFYGPNDPK RLTVNPEDWA SRLGSDFIRN SKISNIDFTS
301: VHIYPDHWFH HQVFEDYMKF VSKWMLSHIE DGDKVLNKPV LFSEYGLSDI NFTMPERKTM YKTILDISYK SAKKNRSGAG ALVWQFLVGG MQEFTDDFGI
401: IPWEKTPIPS LFVEQSCRLA KTKGWPHKDT SFKQFC
001: MAAPTGNGPV IPILGFLTCV AFIYLSFGDL WFGLKTEGEL AFVKRNGTQF VVDGKALYVN GWNSYWFMDH AVNDHSRHRV SAMLEAGAKM GLTVCRTWAF
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP
101: NDGGYNALQI SPGRFDERVF KALDHVIAEA KTHGVRLLLS LVNNLQAYGG KTQYVNWAWQ EGVGLSSSND SFFFDPSIRR YFKNYLTVLL TRKNSLTGIE
201: YRNDPTIFAW ELINEPRCMS DVSGDTLQDW INEMTAFIKS IDNKHLLTVG LEGFYGPSSP KKLTVNPERW ASELGSDFVR NSDSPNIDFA SVHIYPDHWF
301: HDQGFEEKLK FVVKWMLSHI EDGDKELKKP VLFTEFGLSN LNKDYDPSQR DRFYRTIFDV IYKSAKRKRS GAGTLVWQFL IEGMEGFNDD FGIVPWEQDS
401: IQRLMIEQSC RLSRITGRHL LDKKSIEMCS HRP
Arabidopsis Description
MAN2Mannan endo-1,4-beta-mannosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q7Y223]
SUBAcon: [plasma membrane,vacuole]
SUBAcon: [plasma membrane,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.