CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 1
vacuole 7
extracellular 4
endoplasmic reticulum 4
plasma membrane 4
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68364	Soybean	vacuole	94.63	94.63
KRH68408	Soybean	vacuole	67.07	66.27
KRG96685	Soybean	golgi, vacuole	64.88	63.48
KRH33420	Soybean	extracellular, golgi	51.71	62.35
PGSC0003DMT400095096	Potato	cytosol	42.93	57.14
GSMUA_Achr6P30560_001	Banana	vacuole	57.32	56.49
Solyc01g008710.2.1	Tomato	extracellular	54.88	56.39
PGSC0003DMT400090248	Potato	cytosol	37.32	56.04
Solyc01g008720.1.1	Tomato	extracellular, golgi, vacuole	54.63	55.86
KRH61141	Soybean	cytosol, nucleus, vacuole	55.12	55.8
KXG31170	Sorghum	golgi, vacuole	55.37	54.96
KRH51830	Soybean	endoplasmic reticulum, vacuole	55.37	54.05
TraesCS6B01G363800.1	Wheat	golgi, vacuole	51.95	52.99
TraesCS6D01G312600.1	Wheat	vacuole	52.68	52.3
KRH23949	Soybean	vacuole	51.71	52.09
KRH39855	Soybean	vacuole	51.71	52.09
TraesCS6A01G333500.1	Wheat	extracellular, vacuole	52.2	51.82
TraesCS6A01G333400.1	Wheat	golgi, vacuole	52.93	51.18
Bra033312.1-P	Field mustard	golgi, vacuole	51.22	51.09
TraesCS6B01G363900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	51.46	51.09
TraesCS6D01G311900.1	Wheat	vacuole	52.93	50.94
CDX89985	Canola	golgi, vacuole	50.98	50.85
KRH28716	Soybean	vacuole	52.68	50.82
CDY15229	Canola	golgi, vacuole	50.24	50.49
TraesCS6A01G333300.1	Wheat	golgi, vacuole	52.44	50.47
TraesCS6D01G312500.1	Wheat	golgi, vacuole	51.46	50.24
TraesCS6B01G363700.1	Wheat	golgi, vacuole	52.2	50.12
KRH15168	Soybean	extracellular, golgi, vacuole	52.2	49.88
HORVU0Hr1G017220.2	Barley	mitochondrion, vacuole	52.44	49.65
KRH05852	Soybean	extracellular, golgi, vacuole	51.95	49.31
Zm00001d052158_P001	Maize	golgi, vacuole	50.98	47.18
AT1G02310.2	Thale cress	golgi, vacuole	49.51	47.1
GSMUA_Achr3P12210_001	Banana	cytosol	54.63	47.06
KRH76746	Soybean	plasma membrane	52.68	45.96
KRH64877	Soybean	endoplasmic reticulum	48.78	43.2
KRH00473	Soybean	nucleus	47.07	41.77
KRH22381	Soybean	vacuole	42.44	40.65
KRH26952	Soybean	extracellular, plasma membrane, vacuole	42.2	40.42
KRH09553	Soybean	endoplasmic reticulum, plastid, vacuole	48.54	40.12
KRH40712	Soybean	nucleus	47.56	39.88
KRH25580	Soybean	mitochondrion	39.27	36.93
KRH55954	Soybean	mitochondrion, vacuole	39.02	36.7
Os02t0766900-00	Rice	extracellular, golgi, vacuole	31.22	29.98

Protein Annotations

EntrezGene:100787923	MapMan:21.2.3.2.2	Gene3D:3.20.20.80	EMBL:ACUP02012162	EnsemblPlantsGene:GLYMA_19G223000	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0016985	GO:GO:0046355	InterPro:Glyco_hydro_5
InterPro:Glycoside_hydrolase_SF	UniProt:I1NBK5	EnsemblPlants:KRG96633	ProteinID:KRG96633	ProteinID:KRG96633.1	PFAM:PF00150
PANTHER:PTHR31451	PANTHER:PTHR31451:SF18	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000233E5F4
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:47524739..47529790

Molecular Weight (calculated)

46216.0 Da

IEP (calculated)

8.202

GRAVY (calculated)

-0.270

Length

410 amino acids

Sequence
(BLAST)

001: MGWNGRLKNM VIVITLMVAL VVVQHVKCGD SARILLQHGG FVQRSSTNFV LNNKRFYFNG FNAYWLMYMA SDPSTRPKVT AVLQQASNHG LTVARTWAFS
101: DGGYRALQVS PGSYDEKVFR GLDFVVSEAG KYGVRLILSL VNNWKDFGGK NQYVQWVKEH GQYVNSEDDF FSHPIAKQHY KNHIKAVLTR KNTITGVAYK
201: DDPAIFAWEL MNEPRSQHDN SGKVIQQWVI EMAAYVKSID SNHLLEIGLE GFYGETMPEK KQINPGYQLI GTDFISNNLV HQVDFATMHL YPEQWLPGSN
301: EAAQVAFVDK WLQTHIQDAK NVLAKPIVVG EFGKSLKSYS VVERDNYLSK MYNAIYSSAS SGGPCAGGLF WQLMAQGMDG FRDGYEVVFE ESPSTTRIID
401: QQSHKMSSIA

Best Arabidopsis Sequence Match ( AT1G02310.2 )
(BLAST)

001: MSLTFHVVSF SFLQVGKSIT MLNILPFFLF FLPFLIGNNR ICVAVKTGFV GRNGTQFVLN GEQVYLNGFN AYWMMTTAAD TASKGRATVT TALRQASAVG
101: MNVARIWGFN EGDYIPLQIS PGSYSEDVFK GLDFVVYEAG RFNIKLIISL VNNFEDYGGR KKYVEWAGLD EPDEFYTNSA VKQFYKNHVK TVLTRKNTIT
201: GRMYKDDPTI FSWELINEPR CNDSTASNIL QDWVKEMASY VKSIDSNHLL EIGLEGFYGE SIPERTVYNP GGRVLTGTDF ITNNQIPDID FATIHIYPDS
301: WLPLQSSRTG EQDTFVDRWI GAHIEDCDNI IKKPLLITEF GKSSKYPGFS LEKRNKFFQR VYDVIYDSAR AGGSCTGGVF WQLTTNRTGL LGDGYEVFMQ
401: AGPNTTAQLI ADQSSKLKNL KYPPLVTHSA E

Arabidopsis Description

MAN1Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQX8]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.