Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 6
- plastid 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89985 | Canola | golgi, vacuole | 85.61 | 89.78 |
| Bra033312.1-P | Field mustard | golgi, vacuole | 85.38 | 89.54 |
| CDY15229 | Canola | golgi, vacuole | 84.69 | 89.46 |
| PGSC0003DMT400090248 | Potato | cytosol | 35.73 | 56.41 |
| PGSC0003DMT400095096 | Potato | cytosol | 38.75 | 54.22 |
| Solyc01g008720.1.1 | Tomato | extracellular, golgi, vacuole | 47.1 | 50.62 |
| Solyc01g008710.2.1 | Tomato | extracellular | 46.64 | 50.38 |
| KRH68364 | Soybean | vacuole | 47.56 | 50.0 |
| KRG96685 | Soybean | golgi, vacuole | 48.49 | 49.88 |
| KRH68408 | Soybean | vacuole | 48.03 | 49.88 |
| KRG96633 | Soybean | nucleus | 47.1 | 49.51 |
| GSMUA_Achr6P30560_001 | Banana | vacuole | 46.17 | 47.84 |
| KRH33420 | Soybean | extracellular, golgi | 37.35 | 47.35 |
| KXG31170 | Sorghum | golgi, vacuole | 44.55 | 46.49 |
| AT5G66460.1 | Thale cress | vacuole | 45.48 | 45.48 |
| TraesCS6B01G363800.1 | Wheat | golgi, vacuole | 40.84 | 43.78 |
| TraesCS6A01G333400.1 | Wheat | golgi, vacuole | 42.46 | 43.16 |
| TraesCS6D01G312600.1 | Wheat | vacuole | 41.3 | 43.1 |
| TraesCS6B01G363900.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 41.07 | 42.86 |
| TraesCS6A01G333500.1 | Wheat | extracellular, vacuole | 41.07 | 42.86 |
| TraesCS6D01G312500.1 | Wheat | golgi, vacuole | 41.76 | 42.86 |
| TraesCS6A01G333300.1 | Wheat | golgi, vacuole | 42.23 | 42.72 |
| AT3G10900.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 40.37 | 42.65 |
| TraesCS6D01G311900.1 | Wheat | vacuole | 41.76 | 42.25 |
| HORVU0Hr1G017220.2 | Barley | mitochondrion, vacuole | 42.23 | 42.03 |
| AT3G10890.1 | Thale cress | extracellular | 40.14 | 41.79 |
| AT3G30540.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 31.79 | 41.64 |
| GSMUA_Achr3P12210_001 | Banana | cytosol | 45.94 | 41.6 |
| TraesCS6B01G363700.1 | Wheat | golgi, vacuole | 41.07 | 41.45 |
| AT5G01930.1 | Thale cress | endoplasmic reticulum | 41.53 | 39.96 |
| AT4G28320.1 | Thale cress | vacuole | 38.75 | 38.75 |
| AT2G20680.1 | Thale cress | plasma membrane, vacuole | 38.52 | 38.34 |
| Zm00001d052158_P001 | Maize | golgi, vacuole | 38.75 | 37.7 |
| Os02t0766900-00 | Rice | extracellular, golgi, vacuole | 23.9 | 24.12 |
Protein Annotations
| MapMan:21.2.3.2.2 | Gene3D:3.20.20.80 | EntrezGene:839444 | UniProt:A0A178WL81 | UniProt:A0A1P8AQX8 | ProteinID:AAG00883.1 |
| ProteinID:AEE27414.1 | ProteinID:ANM59069.1 | ArrayExpress:AT1G02310 | EnsemblPlantsGene:AT1G02310 | RefSeq:AT1G02310 | TAIR:AT1G02310 |
| RefSeq:AT1G02310-TAIR-G | EnsemblPlants:AT1G02310.2 | EMBL:AY081352 | Unigene:At.42610 | EMBL:BT002154 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0016798 | GO:GO:0016985 | GO:GO:0046355 | InterPro:Glyco_hydro_5 | InterPro:Glycoside_hydrolase_SF | Symbol:MAN1 |
| RefSeq:NP_001321462.1 | RefSeq:NP_171733.2 | ProteinID:OAP18946.1 | PFAM:PF00150 | PANTHER:PTHR31451 | PANTHER:PTHR31451:SF18 |
| SUPFAM:SSF51445 | TMHMM:TMhelix | UniParc:UPI00000481A5 | SEG:seg | : | : |
Description
MAN1Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQX8]
Coordinates
chr1:-:458243..460831
Molecular Weight (calculated)
48503.6 Da
IEP (calculated)
6.267
GRAVY (calculated)
-0.195
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLTFHVVSF SFLQVGKSIT MLNILPFFLF FLPFLIGNNR ICVAVKTGFV GRNGTQFVLN GEQVYLNGFN AYWMMTTAAD TASKGRATVT TALRQASAVG
101: MNVARIWGFN EGDYIPLQIS PGSYSEDVFK GLDFVVYEAG RFNIKLIISL VNNFEDYGGR KKYVEWAGLD EPDEFYTNSA VKQFYKNHVK TVLTRKNTIT
201: GRMYKDDPTI FSWELINEPR CNDSTASNIL QDWVKEMASY VKSIDSNHLL EIGLEGFYGE SIPERTVYNP GGRVLTGTDF ITNNQIPDID FATIHIYPDS
301: WLPLQSSRTG EQDTFVDRWI GAHIEDCDNI IKKPLLITEF GKSSKYPGFS LEKRNKFFQR VYDVIYDSAR AGGSCTGGVF WQLTTNRTGL LGDGYEVFMQ
401: AGPNTTAQLI ADQSSKLKNL KYPPLVTHSA E
101: MNVARIWGFN EGDYIPLQIS PGSYSEDVFK GLDFVVYEAG RFNIKLIISL VNNFEDYGGR KKYVEWAGLD EPDEFYTNSA VKQFYKNHVK TVLTRKNTIT
201: GRMYKDDPTI FSWELINEPR CNDSTASNIL QDWVKEMASY VKSIDSNHLL EIGLEGFYGE SIPERTVYNP GGRVLTGTDF ITNNQIPDID FATIHIYPDS
301: WLPLQSSRTG EQDTFVDRWI GAHIEDCDNI IKKPLLITEF GKSSKYPGFS LEKRNKFFQR VYDVIYDSAR AGGSCTGGVF WQLTTNRTGL LGDGYEVFMQ
401: AGPNTTAQLI ADQSSKLKNL KYPPLVTHSA E
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.