Factsheet for TraesCS6D01G312600.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G363900.1	Wheat	endoplasmic reticulum, extracellular, vacuole	94.67	94.67
TraesCS6A01G333500.1	Wheat	extracellular, vacuole	94.19	94.19
TraesCS6D01G311900.1	Wheat	vacuole	75.54	73.24
TraesCS6D01G312500.1	Wheat	golgi, vacuole	72.64	71.43
KXG31170	Sorghum	golgi, vacuole	67.55	67.55
PGSC0003DMT400090248	Potato	cytosol	37.29	56.41
Zm00001d052158_P001	Maize	golgi, vacuole	60.05	55.98
GSMUA_Achr6P30560_001	Banana	vacuole	54.96	54.57
PGSC0003DMT400095096	Potato	cytosol	39.95	53.57
KRH68364	Soybean	vacuole	52.78	53.17
KRG96633	Soybean	nucleus	52.3	52.68
Solyc01g008710.2.1	Tomato	extracellular	49.88	51.63
Solyc01g008720.1.1	Tomato	extracellular, golgi, vacuole	48.91	50.37
TraesCS3D01G241300.1	Wheat	extracellular	51.82	50.35
KRG96685	Soybean	golgi, vacuole	48.43	47.73
KRH68408	Soybean	vacuole	47.22	46.99
KRH33420	Soybean	extracellular, golgi	38.5	46.76
Bra033312.1-P	Field mustard	golgi, vacuole	44.31	44.53
CDX89985	Canola	golgi, vacuole	44.07	44.28
CDY15229	Canola	golgi, vacuole	42.86	43.38
TraesCS5D01G145900.1	Wheat	cytosol	39.71	42.49
AT1G02310.2	Thale cress	golgi, vacuole	43.1	41.3
TraesCS5D01G504800.1	Wheat	vacuole	45.04	39.16
Os02t0766900-00	Rice	extracellular, golgi, vacuole	38.5	37.24
TraesCS3D01G273400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	39.71	36.85
TraesCS7D01G225500.1	Wheat	vacuole	37.05	35.66

Protein Annotations

EnsemblPlants:TraesCS6D01G312600.1	EnsemblPlantsGene:TraesCS6D01G312600	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF
PANTHER:PTHR31451	PANTHER:PTHR31451:SF20	PFAM:PF00150	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF51445
MapMan:21.2.3.2.2	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:421798657..421801031

Molecular Weight (calculated)

45655.1 Da

IEP (calculated)

8.073

GRAVY (calculated)

-0.235

Length

413 amino acids

Sequence
(BLAST)

001: MATSSPQLVM LVSCLAALAL AAGAGEADGR PKARRFVTAS GARFMAGGRP FYADGFNAYW LMYMASNPAD RSKVLDVLDQ ASRLGPTVVR TWAFSDGQGS
101: DRSLQITPGV HNEQVFVGLD FVIAEAKKRG IYLILSLVNN MDSFGGKKQY VQWARDRGHY LGSDDDFFSD ALTQQFYKNH IKRMVTRVNT FTRVAYKDEP
201: TIFAWELMNE PRVPSDLSGK TMERWVASMS AYVKSVDPKH MVEIGMEGFY GESTPERKRF NPGQGYTGGT DFISNNHIPT VDFATIHIYP DQWLPGSSSH
301: AQVEFTKRWM ASHIEDAGKA LRKSLLVAEF GWSARSGGYT VAARDGYFRM VYDAIYASVK GGGPCAGGLF WHVMAPGMES WTDGYDVVFE RSPTTAAVVS
401: QECAKIDRIT SAV

Best Arabidopsis Sequence Match ( AT3G10900.1 )
(BLAST)

001: MKCLCFIVLL AIVIAQSYVG VEAAPSDGFV SRNGVQFILN GKPFYANGFN AYWLAYEATD PTTRFKITNV FQNATSLGLT IARTWGFRDG AIYRALQTAP
101: GSYDEQTFQG LDFVIAEAKR IGIKLIILLV NNWDDYGGKK QYVDWARSKG EVVSSNDDFY RNPVIKDFYK NHVKTVLNRV NTFTKVAYKD EPAIMAWQLM
201: NEPRCGVDKS GKTLMDWINE MAPFVKSVDP NHLLSTGHEG FYGDSSPERK NSLNPVSANT VGADFIANHN IDAIDFASMH CGSDLWFQRL DQNSRLAFIK
301: RWLEGHIEDA QNILKKPVIL AEFGLGSDTP RYTLANRDGV FTTTYDIIYA SAQKGGSAAG ALFWEVISEG MSNFAGPSSI ILSDKSSTVN IISEHARKMG
401: LLGETTRK

Arabidopsis Description

MAN4Putative mannan endo-1,4-beta-mannosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SG95]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.