Factsheet for TraesCS6D01G311900.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G363700.1	Wheat	golgi, vacuole	95.77	95.55
TraesCS6A01G333300.1	Wheat	golgi, vacuole	94.37	94.37
HORVU0Hr1G017220.2	Barley	mitochondrion, vacuole	89.91	88.45
TraesCS6D01G312500.1	Wheat	golgi, vacuole	81.46	82.62
TraesCS6D01G312600.1	Wheat	vacuole	73.24	75.54
KXG31170	Sorghum	golgi, vacuole	65.49	67.55
Zm00001d052158_P001	Maize	golgi, vacuole	60.56	58.24
GSMUA_Achr6P30560_001	Banana	vacuole	53.76	55.05
PGSC0003DMT400090248	Potato	cytosol	34.98	54.58
PGSC0003DMT400095096	Potato	cytosol	39.2	54.22
KRH68364	Soybean	vacuole	51.17	53.17
KRG96633	Soybean	nucleus	50.94	52.93
Solyc01g008710.2.1	Tomato	extracellular	47.65	50.88
Solyc01g008720.1.1	Tomato	extracellular, golgi, vacuole	47.42	50.37
TraesCS3D01G241300.1	Wheat	extracellular	48.83	48.94
KRH68408	Soybean	vacuole	46.48	47.71
KRG96685	Soybean	golgi, vacuole	46.01	46.78
KRH33420	Soybean	extracellular, golgi	36.15	45.29
Bra033312.1-P	Field mustard	golgi, vacuole	43.43	45.01
CDX89985	Canola	golgi, vacuole	43.19	44.77
CDY15229	Canola	golgi, vacuole	42.02	43.87
TraesCS5D01G145900.1	Wheat	cytosol	39.2	43.26
AT1G02310.2	Thale cress	golgi, vacuole	42.25	41.76
TraesCS5D01G504800.1	Wheat	vacuole	45.07	40.42
Os02t0766900-00	Rice	extracellular, golgi, vacuole	37.56	37.47
TraesCS3D01G273400.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	38.97	37.3
TraesCS7D01G225500.1	Wheat	vacuole	37.56	37.3

Protein Annotations

EnsemblPlants:TraesCS6D01G311900.1	EnsemblPlantsGene:TraesCS6D01G311900	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_5	InterPro:Glycoside_hydrolase_SF
PANTHER:PTHR31451	PANTHER:PTHR31451:SF20	PFAM:PF00150	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF51445
MapMan:21.2.3.2.2	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:421472693..421474927

Molecular Weight (calculated)

46593.2 Da

IEP (calculated)

8.674

GRAVY (calculated)

-0.277

Length

426 amino acids

Sequence
(BLAST)

001: MGTSNARRLM VVSCLAVLAL AAGAHRPSVH HAAAPSAAAP APSNGGVEAK VRGFARADGA RFTVGGRPFY PNGFNAYWLM YMASNPGDRS KVLATLDQAS
101: RLGATVIRTW AFNDGGSNRP MQITPGVYSE DVFLGLDFVI GEAKKRGLYL ILSLANNWGD FGGKKQYVQW AKDQGHNLGS EDDFFTDRHT QRFYMNHIKR
201: VLTRVNNFTG VAYKDEPTIF AWELMNEPRV PSDLSGKTMQ AWVALMSSYV KSVDGKHMVE IGLEGFYGDS APERKRFNPG GKYSAGTDFI GNNRIPTVDF
301: ATIHSYPDQW VPGSTSEQQV EFMKKWMASH TEDAASALRK PLLVAEFGWK SSGNAVAQRD DYFRMVYDAI YASVKGGGPC AGGLFWQVMA PGMESWADGY
401: EVVLERSPST TAVVSQECAR IGGITP

Best Arabidopsis Sequence Match ( AT1G02310.2 )
(BLAST)

001: MSLTFHVVSF SFLQVGKSIT MLNILPFFLF FLPFLIGNNR ICVAVKTGFV GRNGTQFVLN GEQVYLNGFN AYWMMTTAAD TASKGRATVT TALRQASAVG
101: MNVARIWGFN EGDYIPLQIS PGSYSEDVFK GLDFVVYEAG RFNIKLIISL VNNFEDYGGR KKYVEWAGLD EPDEFYTNSA VKQFYKNHVK TVLTRKNTIT
201: GRMYKDDPTI FSWELINEPR CNDSTASNIL QDWVKEMASY VKSIDSNHLL EIGLEGFYGE SIPERTVYNP GGRVLTGTDF ITNNQIPDID FATIHIYPDS
301: WLPLQSSRTG EQDTFVDRWI GAHIEDCDNI IKKPLLITEF GKSSKYPGFS LEKRNKFFQR VYDVIYDSAR AGGSCTGGVF WQLTTNRTGL LGDGYEVFMQ
401: AGPNTTAQLI ADQSSKLKNL KYPPLVTHSA E

Arabidopsis Description

MAN1Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AQX8]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.